Gene : Carub.0001s1196 C. rubella v1.1
Defline:  (1 of 17) K13459 - disease resistance protein RPS2 (RPS2) Genomic Order:  1196
Name:  ? Carub.0001s1196 Secondary Identifier:  ? PAC:39228752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1196 0.5kb upstream 0.5kb upstream 4692 true scaffold_1: 4255297-4259988 Capsella rubella
Carub.0001s1196 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4259489-4259988 Capsella rubella
Carub.0001s1196 0.5kb downstream 0.5kb downstream 4692 true scaffold_1: 4254797-4259488 Capsella rubella
Carub.0001s1196 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4254797-4255296 Capsella rubella
Carub.0001s1196 1.0kb upstream 1.0kb upstream 5192 true scaffold_1: 4255297-4260488 Capsella rubella
Carub.0001s1196 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4259489-4260488 Capsella rubella
Carub.0001s1196 1.0kb downstream 1.0kb downstream 5192 true scaffold_1: 4254297-4259488 Capsella rubella
Carub.0001s1196 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4254297-4255296 Capsella rubella
Carub.0001s1196 2.0kb upstream 2.0kb upstream 6192 true scaffold_1: 4255297-4261488 Capsella rubella
Carub.0001s1196 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4259489-4261488 Capsella rubella
Carub.0001s1196 2.0kb downstream 2.0kb downstream 6192 true scaffold_1: 4253297-4259488 Capsella rubella
Carub.0001s1196 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4253297-4255296 Capsella rubella
Carub.0001s1196 5.0kb upstream 5.0kb upstream 9192 true scaffold_1: 4255297-4264488 Capsella rubella
Carub.0001s1196 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4259489-4264488 Capsella rubella
Carub.0001s1196 5.0kb downstream 5.0kb downstream 9192 true scaffold_1: 4250297-4259488 Capsella rubella
Carub.0001s1196 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4250297-4255296 Capsella rubella
Carub.0001s1196 10.0kb upstream 10.0kb upstream 14192 true scaffold_1: 4255297-4269488 Capsella rubella
Carub.0001s1196 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4259489-4269488 Capsella rubella
Carub.0001s1196 10.0kb downstream 10.0kb downstream 14192 true scaffold_1: 4245297-4259488 Capsella rubella
Carub.0001s1196 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4245297-4255296 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381208 5261 Brassicaceae View MSA
123838476 5264 Brassicales-Malvales View MSA
124351411 5266 SBM View MSA
124254691 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain