Gene : Carub.0001s1163 C. rubella v1.1

Defline:  (1 of 2) K06997 - uncharacterized protein (K06997) Genomic Order:  1163
Name:  ? Carub.0001s1163 Secondary Identifier:  ? PAC:39228414

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1163 0.5kb upstream 0.5kb upstream 2335 true scaffold_1: 4127586-4129920 Capsella rubella
Carub.0001s1163 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4127586-4128085 Capsella rubella
Carub.0001s1163 0.5kb downstream 0.5kb downstream 2335 true scaffold_1: 4128086-4130420 Capsella rubella
Carub.0001s1163 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4129921-4130420 Capsella rubella
Carub.0001s1163 1.0kb upstream 1.0kb upstream 2835 true scaffold_1: 4127086-4129920 Capsella rubella
Carub.0001s1163 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4127086-4128085 Capsella rubella
Carub.0001s1163 1.0kb downstream 1.0kb downstream 2835 true scaffold_1: 4128086-4130920 Capsella rubella
Carub.0001s1163 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4129921-4130920 Capsella rubella
Carub.0001s1163 2.0kb upstream 2.0kb upstream 3835 true scaffold_1: 4126086-4129920 Capsella rubella
Carub.0001s1163 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4126086-4128085 Capsella rubella
Carub.0001s1163 2.0kb downstream 2.0kb downstream 3835 true scaffold_1: 4128086-4131920 Capsella rubella
Carub.0001s1163 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4129921-4131920 Capsella rubella
Carub.0001s1163 5.0kb upstream 5.0kb upstream 6835 true scaffold_1: 4123086-4129920 Capsella rubella
Carub.0001s1163 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4123086-4128085 Capsella rubella
Carub.0001s1163 5.0kb downstream 5.0kb downstream 6835 true scaffold_1: 4128086-4134920 Capsella rubella
Carub.0001s1163 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4129921-4134920 Capsella rubella
Carub.0001s1163 10.0kb upstream 10.0kb upstream 11835 true scaffold_1: 4118086-4129920 Capsella rubella
Carub.0001s1163 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4118086-4128085 Capsella rubella
Carub.0001s1163 10.0kb downstream 10.0kb downstream 11835 true scaffold_1: 4128086-4139920 Capsella rubella
Carub.0001s1163 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4129921-4139920 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371182 5261 Brassicaceae View MSA
123834586 5264 Brassicales-Malvales View MSA
124343996 5266 SBM View MSA
124240066 5268 Malvidae View MSA
124066747 5270 Rosid View MSA
123741353 5271 Pentapetalae View MSA
122795077 5272 Eudicot View MSA
122042316 5273 Angiosperm View MSA
121344237 5274 Embryophyte View MSA
123424021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain