Gene : Carub.0001s1155 C. rubella v1.1
Defline:  (1 of 1) PTHR21136//PTHR21136:SF89 - SNARE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1155
Name:  ? Carub.0001s1155 Secondary Identifier:  ? PAC:39229228
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1155 0.5kb upstream 0.5kb upstream 2934 true scaffold_1: 4106613-4109546 Capsella rubella
Carub.0001s1155 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4106613-4107112 Capsella rubella
Carub.0001s1155 0.5kb downstream 0.5kb downstream 2934 true scaffold_1: 4107113-4110046 Capsella rubella
Carub.0001s1155 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4109547-4110046 Capsella rubella
Carub.0001s1155 1.0kb upstream 1.0kb upstream 3434 true scaffold_1: 4106113-4109546 Capsella rubella
Carub.0001s1155 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4106113-4107112 Capsella rubella
Carub.0001s1155 1.0kb downstream 1.0kb downstream 3434 true scaffold_1: 4107113-4110546 Capsella rubella
Carub.0001s1155 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4109547-4110546 Capsella rubella
Carub.0001s1155 2.0kb upstream 2.0kb upstream 4434 true scaffold_1: 4105113-4109546 Capsella rubella
Carub.0001s1155 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4105113-4107112 Capsella rubella
Carub.0001s1155 2.0kb downstream 2.0kb downstream 4434 true scaffold_1: 4107113-4111546 Capsella rubella
Carub.0001s1155 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4109547-4111546 Capsella rubella
Carub.0001s1155 5.0kb upstream 5.0kb upstream 7434 true scaffold_1: 4102113-4109546 Capsella rubella
Carub.0001s1155 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4102113-4107112 Capsella rubella
Carub.0001s1155 5.0kb downstream 5.0kb downstream 7434 true scaffold_1: 4107113-4114546 Capsella rubella
Carub.0001s1155 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4109547-4114546 Capsella rubella
Carub.0001s1155 10.0kb upstream 10.0kb upstream 12434 true scaffold_1: 4097113-4109546 Capsella rubella
Carub.0001s1155 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4097113-4107112 Capsella rubella
Carub.0001s1155 10.0kb downstream 10.0kb downstream 12434 true scaffold_1: 4107113-4119546 Capsella rubella
Carub.0001s1155 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4109547-4119546 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375553 5261 Brassicaceae View MSA
123833989 5264 Brassicales-Malvales View MSA
124346272 5266 SBM View MSA
124254276 5268 Malvidae View MSA
124065843 5270 Rosid View MSA
123753791 5271 Pentapetalae View MSA
122788214 5272 Eudicot View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain