Gene : Carub.0001s0912 C. rubella v1.1
Defline:  (1 of 2) 5.4.2.11//5.4.2.12 - Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) / Phosphoglyceromutase // Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) / Phosphoglyceromutase Genomic Order:  912
Name:  ? Carub.0001s0912 Secondary Identifier:  ? PAC:39230535
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ANAEROFRUCAT-PWY Capsella rubella pathologic  
Crubella ANAGLYCOLYSIS-PWY Capsella rubella pathologic  
Crubella GLUCONEO-PWY Capsella rubella pathologic  
Crubella PWY-1042 Capsella rubella pathologic  
Crubella PWY-5464 Capsella rubella pathologic  
Crubella PWY-5723 Capsella rubella pathologic  
Crubella PWY66-399 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0912 0.5kb upstream 0.5kb upstream 4070 true scaffold_1: 3236615-3240684 Capsella rubella
Carub.0001s0912 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3240185-3240684 Capsella rubella
Carub.0001s0912 0.5kb downstream 0.5kb downstream 4070 true scaffold_1: 3236115-3240184 Capsella rubella
Carub.0001s0912 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3236115-3236614 Capsella rubella
Carub.0001s0912 1.0kb upstream 1.0kb upstream 4570 true scaffold_1: 3236615-3241184 Capsella rubella
Carub.0001s0912 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3240185-3241184 Capsella rubella
Carub.0001s0912 1.0kb downstream 1.0kb downstream 4570 true scaffold_1: 3235615-3240184 Capsella rubella
Carub.0001s0912 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3235615-3236614 Capsella rubella
Carub.0001s0912 2.0kb upstream 2.0kb upstream 5570 true scaffold_1: 3236615-3242184 Capsella rubella
Carub.0001s0912 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3240185-3242184 Capsella rubella
Carub.0001s0912 2.0kb downstream 2.0kb downstream 5570 true scaffold_1: 3234615-3240184 Capsella rubella
Carub.0001s0912 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3234615-3236614 Capsella rubella
Carub.0001s0912 5.0kb upstream 5.0kb upstream 8570 true scaffold_1: 3236615-3245184 Capsella rubella
Carub.0001s0912 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3240185-3245184 Capsella rubella
Carub.0001s0912 5.0kb downstream 5.0kb downstream 8570 true scaffold_1: 3231615-3240184 Capsella rubella
Carub.0001s0912 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3231615-3236614 Capsella rubella
Carub.0001s0912 10.0kb upstream 10.0kb upstream 13570 true scaffold_1: 3236615-3250184 Capsella rubella
Carub.0001s0912 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3240185-3250184 Capsella rubella
Carub.0001s0912 10.0kb downstream 10.0kb downstream 13570 true scaffold_1: 3226615-3240184 Capsella rubella
Carub.0001s0912 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3226615-3236614 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372851 5261 Brassicaceae View MSA
123836742 5264 Brassicales-Malvales View MSA
124338470 5266 SBM View MSA
124253094 5268 Malvidae View MSA
124066615 5270 Rosid View MSA
123743757 5271 Pentapetalae View MSA
122792316 5272 Eudicot View MSA
122046842 5273 Angiosperm View MSA
121351073 5274 Embryophyte View MSA
123427099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain