Gene : Carub.0001s1005 C. rubella v1.1
Defline:  (1 of 6) PTHR23201//PTHR23201:SF10 - EXTENSIN, PROLINE-RICH PROTEIN // GIBBERELLIN-REGULATED GASA/GAST/SNAKIN FAMILY PROTEIN-RELATED Genomic Order:  1005
Name:  ? Carub.0001s1005 Secondary Identifier:  ? PAC:39231484
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1005 0.5kb upstream 0.5kb upstream 884 true scaffold_1: 3592560-3593443 Capsella rubella
Carub.0001s1005 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3592560-3593059 Capsella rubella
Carub.0001s1005 0.5kb downstream 0.5kb downstream 884 true scaffold_1: 3593060-3593943 Capsella rubella
Carub.0001s1005 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3593444-3593943 Capsella rubella
Carub.0001s1005 1.0kb upstream 1.0kb upstream 1384 true scaffold_1: 3592060-3593443 Capsella rubella
Carub.0001s1005 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3592060-3593059 Capsella rubella
Carub.0001s1005 1.0kb downstream 1.0kb downstream 1384 true scaffold_1: 3593060-3594443 Capsella rubella
Carub.0001s1005 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3593444-3594443 Capsella rubella
Carub.0001s1005 2.0kb upstream 2.0kb upstream 2384 true scaffold_1: 3591060-3593443 Capsella rubella
Carub.0001s1005 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3591060-3593059 Capsella rubella
Carub.0001s1005 2.0kb downstream 2.0kb downstream 2384 true scaffold_1: 3593060-3595443 Capsella rubella
Carub.0001s1005 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3593444-3595443 Capsella rubella
Carub.0001s1005 5.0kb upstream 5.0kb upstream 5384 true scaffold_1: 3588060-3593443 Capsella rubella
Carub.0001s1005 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3588060-3593059 Capsella rubella
Carub.0001s1005 5.0kb downstream 5.0kb downstream 5384 true scaffold_1: 3593060-3598443 Capsella rubella
Carub.0001s1005 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3593444-3598443 Capsella rubella
Carub.0001s1005 10.0kb upstream 10.0kb upstream 10384 true scaffold_1: 3583060-3593443 Capsella rubella
Carub.0001s1005 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3583060-3593059 Capsella rubella
Carub.0001s1005 10.0kb downstream 10.0kb downstream 10384 true scaffold_1: 3593060-3603443 Capsella rubella
Carub.0001s1005 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3593444-3603443 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379327 5261 Brassicaceae View MSA
123833908 5264 Brassicales-Malvales View MSA
124344537 5266 SBM View MSA
124252864 5268 Malvidae View MSA
124074083 5270 Rosid View MSA
123750435 5271 Pentapetalae View MSA
122791253 5272 Eudicot View MSA
122044591 5273 Angiosperm View MSA
121310316 5274 Embryophyte View MSA
123347833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain