Gene : Carub.0006s0112 C. rubella v1.1
Defline:  (1 of 1) KOG3369 - Transport protein particle (TRAPP) complex subunit Genomic Order:  112
Name:  ? Carub.0006s0112 Secondary Identifier:  ? PAC:39248177
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0112 0.5kb upstream 0.5kb upstream 2162 true scaffold_6: 416593-418754 Capsella rubella
Carub.0006s0112 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 416593-417092 Capsella rubella
Carub.0006s0112 0.5kb downstream 0.5kb downstream 2162 true scaffold_6: 417093-419254 Capsella rubella
Carub.0006s0112 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 418755-419254 Capsella rubella
Carub.0006s0112 1.0kb upstream 1.0kb upstream 2662 true scaffold_6: 416093-418754 Capsella rubella
Carub.0006s0112 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 416093-417092 Capsella rubella
Carub.0006s0112 1.0kb downstream 1.0kb downstream 2662 true scaffold_6: 417093-419754 Capsella rubella
Carub.0006s0112 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 418755-419754 Capsella rubella
Carub.0006s0112 2.0kb upstream 2.0kb upstream 3662 true scaffold_6: 415093-418754 Capsella rubella
Carub.0006s0112 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 415093-417092 Capsella rubella
Carub.0006s0112 2.0kb downstream 2.0kb downstream 3662 true scaffold_6: 417093-420754 Capsella rubella
Carub.0006s0112 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 418755-420754 Capsella rubella
Carub.0006s0112 5.0kb upstream 5.0kb upstream 6662 true scaffold_6: 412093-418754 Capsella rubella
Carub.0006s0112 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 412093-417092 Capsella rubella
Carub.0006s0112 5.0kb downstream 5.0kb downstream 6662 true scaffold_6: 417093-423754 Capsella rubella
Carub.0006s0112 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 418755-423754 Capsella rubella
Carub.0006s0112 10.0kb upstream 10.0kb upstream 11662 true scaffold_6: 407093-418754 Capsella rubella
Carub.0006s0112 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 407093-417092 Capsella rubella
Carub.0006s0112 10.0kb downstream 10.0kb downstream 11662 true scaffold_6: 417093-428754 Capsella rubella
Carub.0006s0112 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 418755-428754 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380042 5261 Brassicaceae View MSA
123838369 5264 Brassicales-Malvales View MSA
124341879 5266 SBM View MSA
124237791 5268 Malvidae View MSA
124062773 5270 Rosid View MSA
123740967 5271 Pentapetalae View MSA
122786625 5272 Eudicot View MSA
122043161 5273 Angiosperm View MSA
121347078 5274 Embryophyte View MSA
123424121 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain