Gene : Carub.0001s0812 C. rubella v1.1

Defline:  (1 of 1) K09550 - prefoldin subunit 4 (PFDN4) Genomic Order:  812
Name:  ? Carub.0001s0812 Secondary Identifier:  ? PAC:39229329

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0812 0.5kb upstream 0.5kb upstream 1884 true scaffold_1: 2886738-2888621 Capsella rubella
Carub.0001s0812 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2888122-2888621 Capsella rubella
Carub.0001s0812 0.5kb downstream 0.5kb downstream 1884 true scaffold_1: 2886238-2888121 Capsella rubella
Carub.0001s0812 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2886238-2886737 Capsella rubella
Carub.0001s0812 1.0kb upstream 1.0kb upstream 2384 true scaffold_1: 2886738-2889121 Capsella rubella
Carub.0001s0812 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2888122-2889121 Capsella rubella
Carub.0001s0812 1.0kb downstream 1.0kb downstream 2384 true scaffold_1: 2885738-2888121 Capsella rubella
Carub.0001s0812 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2885738-2886737 Capsella rubella
Carub.0001s0812 2.0kb upstream 2.0kb upstream 3384 true scaffold_1: 2886738-2890121 Capsella rubella
Carub.0001s0812 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2888122-2890121 Capsella rubella
Carub.0001s0812 2.0kb downstream 2.0kb downstream 3384 true scaffold_1: 2884738-2888121 Capsella rubella
Carub.0001s0812 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2884738-2886737 Capsella rubella
Carub.0001s0812 5.0kb upstream 5.0kb upstream 6384 true scaffold_1: 2886738-2893121 Capsella rubella
Carub.0001s0812 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2888122-2893121 Capsella rubella
Carub.0001s0812 5.0kb downstream 5.0kb downstream 6384 true scaffold_1: 2881738-2888121 Capsella rubella
Carub.0001s0812 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2881738-2886737 Capsella rubella
Carub.0001s0812 10.0kb upstream 10.0kb upstream 11384 true scaffold_1: 2886738-2898121 Capsella rubella
Carub.0001s0812 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2888122-2898121 Capsella rubella
Carub.0001s0812 10.0kb downstream 10.0kb downstream 11384 true scaffold_1: 2876738-2888121 Capsella rubella
Carub.0001s0812 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2876738-2886737 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371188 5261 Brassicaceae View MSA
123839539 5264 Brassicales-Malvales View MSA
124337520 5266 SBM View MSA
124244969 5268 Malvidae View MSA
124063538 5270 Rosid View MSA
123738844 5271 Pentapetalae View MSA
122790794 5272 Eudicot View MSA
122043024 5273 Angiosperm View MSA
121347563 5274 Embryophyte View MSA
123426081 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain