Gene : Carub.0001s0814 C. rubella v1.1
Defline:  (1 of 16) PF04576 - Zein-binding (Zein-binding) Genomic Order:  814
Name:  ? Carub.0001s0814 Secondary Identifier:  ? PAC:39230788
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0814 0.5kb upstream 0.5kb upstream 5155 true scaffold_1: 2890144-2895298 Capsella rubella
Carub.0001s0814 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2894799-2895298 Capsella rubella
Carub.0001s0814 0.5kb downstream 0.5kb downstream 5155 true scaffold_1: 2889644-2894798 Capsella rubella
Carub.0001s0814 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2889644-2890143 Capsella rubella
Carub.0001s0814 1.0kb upstream 1.0kb upstream 5655 true scaffold_1: 2890144-2895798 Capsella rubella
Carub.0001s0814 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2894799-2895798 Capsella rubella
Carub.0001s0814 1.0kb downstream 1.0kb downstream 5655 true scaffold_1: 2889144-2894798 Capsella rubella
Carub.0001s0814 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2889144-2890143 Capsella rubella
Carub.0001s0814 2.0kb upstream 2.0kb upstream 6655 true scaffold_1: 2890144-2896798 Capsella rubella
Carub.0001s0814 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2894799-2896798 Capsella rubella
Carub.0001s0814 2.0kb downstream 2.0kb downstream 6655 true scaffold_1: 2888144-2894798 Capsella rubella
Carub.0001s0814 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2888144-2890143 Capsella rubella
Carub.0001s0814 5.0kb upstream 5.0kb upstream 9655 true scaffold_1: 2890144-2899798 Capsella rubella
Carub.0001s0814 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2894799-2899798 Capsella rubella
Carub.0001s0814 5.0kb downstream 5.0kb downstream 9655 true scaffold_1: 2885144-2894798 Capsella rubella
Carub.0001s0814 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2885144-2890143 Capsella rubella
Carub.0001s0814 10.0kb upstream 10.0kb upstream 14655 true scaffold_1: 2890144-2904798 Capsella rubella
Carub.0001s0814 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2894799-2904798 Capsella rubella
Carub.0001s0814 10.0kb downstream 10.0kb downstream 14655 true scaffold_1: 2880144-2894798 Capsella rubella
Carub.0001s0814 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2880144-2890143 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362027 5261 Brassicaceae View MSA
123838989 5264 Brassicales-Malvales View MSA
124350144 5266 SBM View MSA
124251951 5268 Malvidae View MSA
124071861 5270 Rosid View MSA
123744785 5271 Pentapetalae View MSA
122794145 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain