Gene : Carub.0006s0127 C. rubella v1.1
Defline:  (1 of 1) PTHR12548//PTHR12548:SF14 - TRANSCRIPTION FACTOR DP // TRANSCRIPTION FACTOR-LIKE PROTEIN DPA Genomic Order:  127
Name:  ? Carub.0006s0127 Secondary Identifier:  ? PAC:39246944
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0127 0.5kb upstream 0.5kb upstream 3215 true scaffold_6: 479267-482481 Capsella rubella
Carub.0006s0127 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 481982-482481 Capsella rubella
Carub.0006s0127 0.5kb downstream 0.5kb downstream 3215 true scaffold_6: 478767-481981 Capsella rubella
Carub.0006s0127 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 478767-479266 Capsella rubella
Carub.0006s0127 1.0kb upstream 1.0kb upstream 3715 true scaffold_6: 479267-482981 Capsella rubella
Carub.0006s0127 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 481982-482981 Capsella rubella
Carub.0006s0127 1.0kb downstream 1.0kb downstream 3715 true scaffold_6: 478267-481981 Capsella rubella
Carub.0006s0127 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 478267-479266 Capsella rubella
Carub.0006s0127 2.0kb upstream 2.0kb upstream 4715 true scaffold_6: 479267-483981 Capsella rubella
Carub.0006s0127 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 481982-483981 Capsella rubella
Carub.0006s0127 2.0kb downstream 2.0kb downstream 4715 true scaffold_6: 477267-481981 Capsella rubella
Carub.0006s0127 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 477267-479266 Capsella rubella
Carub.0006s0127 5.0kb upstream 5.0kb upstream 7715 true scaffold_6: 479267-486981 Capsella rubella
Carub.0006s0127 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 481982-486981 Capsella rubella
Carub.0006s0127 5.0kb downstream 5.0kb downstream 7715 true scaffold_6: 474267-481981 Capsella rubella
Carub.0006s0127 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 474267-479266 Capsella rubella
Carub.0006s0127 10.0kb upstream 10.0kb upstream 12715 true scaffold_6: 479267-491981 Capsella rubella
Carub.0006s0127 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 481982-491981 Capsella rubella
Carub.0006s0127 10.0kb downstream 10.0kb downstream 12715 true scaffold_6: 469267-481981 Capsella rubella
Carub.0006s0127 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 469267-479266 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370244 5261 Brassicaceae View MSA
123839640 5264 Brassicales-Malvales View MSA
124322629 5266 SBM View MSA
124169186 5268 Malvidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain