Gene : Carub.0001s0858 C. rubella v1.1
Defline:  (1 of 5) 2.5.1.43 - Nicotianamine synthase Genomic Order:  858
Name:  ? Carub.0001s0858 Secondary Identifier:  ? PAC:39229386
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5957 Capsella rubella pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0858 0.5kb upstream 0.5kb upstream 1472 true scaffold_1: 3062593-3064064 Capsella rubella
Carub.0001s0858 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3062593-3063092 Capsella rubella
Carub.0001s0858 0.5kb downstream 0.5kb downstream 1472 true scaffold_1: 3063093-3064564 Capsella rubella
Carub.0001s0858 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3064065-3064564 Capsella rubella
Carub.0001s0858 1.0kb upstream 1.0kb upstream 1972 true scaffold_1: 3062093-3064064 Capsella rubella
Carub.0001s0858 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3062093-3063092 Capsella rubella
Carub.0001s0858 1.0kb downstream 1.0kb downstream 1972 true scaffold_1: 3063093-3065064 Capsella rubella
Carub.0001s0858 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3064065-3065064 Capsella rubella
Carub.0001s0858 2.0kb upstream 2.0kb upstream 2972 true scaffold_1: 3061093-3064064 Capsella rubella
Carub.0001s0858 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3061093-3063092 Capsella rubella
Carub.0001s0858 2.0kb downstream 2.0kb downstream 2972 true scaffold_1: 3063093-3066064 Capsella rubella
Carub.0001s0858 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3064065-3066064 Capsella rubella
Carub.0001s0858 5.0kb upstream 5.0kb upstream 5972 true scaffold_1: 3058093-3064064 Capsella rubella
Carub.0001s0858 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3058093-3063092 Capsella rubella
Carub.0001s0858 5.0kb downstream 5.0kb downstream 5972 true scaffold_1: 3063093-3069064 Capsella rubella
Carub.0001s0858 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3064065-3069064 Capsella rubella
Carub.0001s0858 10.0kb upstream 10.0kb upstream 10972 true scaffold_1: 3053093-3064064 Capsella rubella
Carub.0001s0858 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3053093-3063092 Capsella rubella
Carub.0001s0858 10.0kb downstream 10.0kb downstream 10972 true scaffold_1: 3063093-3074064 Capsella rubella
Carub.0001s0858 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3064065-3074064 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367784 5261 Brassicaceae View MSA
123830815 5264 Brassicales-Malvales View MSA
124346963 5266 SBM View MSA
124238052 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain