Gene : Carub.0001s1145 C. rubella v1.1
Defline:  (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease Genomic Order:  1145
Name:  ? Carub.0001s1145 Secondary Identifier:  ? PAC:39227109
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1145 0.5kb upstream 0.5kb upstream 2391 true scaffold_1: 4076519-4078909 Capsella rubella
Carub.0001s1145 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4078410-4078909 Capsella rubella
Carub.0001s1145 0.5kb downstream 0.5kb downstream 2391 true scaffold_1: 4076019-4078409 Capsella rubella
Carub.0001s1145 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4076019-4076518 Capsella rubella
Carub.0001s1145 1.0kb upstream 1.0kb upstream 2891 true scaffold_1: 4076519-4079409 Capsella rubella
Carub.0001s1145 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4078410-4079409 Capsella rubella
Carub.0001s1145 1.0kb downstream 1.0kb downstream 2891 true scaffold_1: 4075519-4078409 Capsella rubella
Carub.0001s1145 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4075519-4076518 Capsella rubella
Carub.0001s1145 2.0kb upstream 2.0kb upstream 3891 true scaffold_1: 4076519-4080409 Capsella rubella
Carub.0001s1145 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4078410-4080409 Capsella rubella
Carub.0001s1145 2.0kb downstream 2.0kb downstream 3891 true scaffold_1: 4074519-4078409 Capsella rubella
Carub.0001s1145 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4074519-4076518 Capsella rubella
Carub.0001s1145 5.0kb upstream 5.0kb upstream 6891 true scaffold_1: 4076519-4083409 Capsella rubella
Carub.0001s1145 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4078410-4083409 Capsella rubella
Carub.0001s1145 5.0kb downstream 5.0kb downstream 6891 true scaffold_1: 4071519-4078409 Capsella rubella
Carub.0001s1145 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4071519-4076518 Capsella rubella
Carub.0001s1145 10.0kb upstream 10.0kb upstream 11891 true scaffold_1: 4076519-4088409 Capsella rubella
Carub.0001s1145 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4078410-4088409 Capsella rubella
Carub.0001s1145 10.0kb downstream 10.0kb downstream 11891 true scaffold_1: 4066519-4078409 Capsella rubella
Carub.0001s1145 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4066519-4076518 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372044 5261 Brassicaceae View MSA
123831243 5264 Brassicales-Malvales View MSA
124343538 5266 SBM View MSA
124237124 5268 Malvidae View MSA
124069027 5270 Rosid View MSA
123737272 5271 Pentapetalae View MSA
122785941 5272 Eudicot View MSA
122044879 5273 Angiosperm View MSA
121344923 5274 Embryophyte View MSA
123425704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain