Gene : Carub.0001s1144 C. rubella v1.1
Defline:  (1 of 5) PTHR32448:SF34 - F22M8.11 PROTEIN-RELATED Genomic Order:  1144
Name:  ? Carub.0001s1144 Secondary Identifier:  ? PAC:39227772
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1144 0.5kb upstream 0.5kb upstream 2102 true scaffold_1: 4074305-4076406 Capsella rubella
Carub.0001s1144 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4074305-4074804 Capsella rubella
Carub.0001s1144 0.5kb downstream 0.5kb downstream 2102 true scaffold_1: 4074805-4076906 Capsella rubella
Carub.0001s1144 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4076407-4076906 Capsella rubella
Carub.0001s1144 1.0kb upstream 1.0kb upstream 2602 true scaffold_1: 4073805-4076406 Capsella rubella
Carub.0001s1144 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4073805-4074804 Capsella rubella
Carub.0001s1144 1.0kb downstream 1.0kb downstream 2602 true scaffold_1: 4074805-4077406 Capsella rubella
Carub.0001s1144 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4076407-4077406 Capsella rubella
Carub.0001s1144 2.0kb upstream 2.0kb upstream 3602 true scaffold_1: 4072805-4076406 Capsella rubella
Carub.0001s1144 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4072805-4074804 Capsella rubella
Carub.0001s1144 2.0kb downstream 2.0kb downstream 3602 true scaffold_1: 4074805-4078406 Capsella rubella
Carub.0001s1144 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4076407-4078406 Capsella rubella
Carub.0001s1144 5.0kb upstream 5.0kb upstream 6602 true scaffold_1: 4069805-4076406 Capsella rubella
Carub.0001s1144 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4069805-4074804 Capsella rubella
Carub.0001s1144 5.0kb downstream 5.0kb downstream 6602 true scaffold_1: 4074805-4081406 Capsella rubella
Carub.0001s1144 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4076407-4081406 Capsella rubella
Carub.0001s1144 10.0kb upstream 10.0kb upstream 11602 true scaffold_1: 4064805-4076406 Capsella rubella
Carub.0001s1144 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4064805-4074804 Capsella rubella
Carub.0001s1144 10.0kb downstream 10.0kb downstream 11602 true scaffold_1: 4074805-4086406 Capsella rubella
Carub.0001s1144 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4076407-4086406 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364385 5261 Brassicaceae View MSA
123798744 5264 Brassicales-Malvales View MSA
124296340 5266 SBM View MSA
124247902 5268 Malvidae View MSA
124069535 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain