Gene : Carub.0001s0501 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  501
Name:  ? Carub.0001s0501 Secondary Identifier:  ? PAC:39230766
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0501 0.5kb upstream 0.5kb upstream 3993 true scaffold_1: 1775309-1779301 Capsella rubella
Carub.0001s0501 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1778802-1779301 Capsella rubella
Carub.0001s0501 0.5kb downstream 0.5kb downstream 3993 true scaffold_1: 1774809-1778801 Capsella rubella
Carub.0001s0501 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1774809-1775308 Capsella rubella
Carub.0001s0501 1.0kb upstream 1.0kb upstream 4493 true scaffold_1: 1775309-1779801 Capsella rubella
Carub.0001s0501 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1778802-1779801 Capsella rubella
Carub.0001s0501 1.0kb downstream 1.0kb downstream 4493 true scaffold_1: 1774309-1778801 Capsella rubella
Carub.0001s0501 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1774309-1775308 Capsella rubella
Carub.0001s0501 2.0kb upstream 2.0kb upstream 5493 true scaffold_1: 1775309-1780801 Capsella rubella
Carub.0001s0501 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1778802-1780801 Capsella rubella
Carub.0001s0501 2.0kb downstream 2.0kb downstream 5493 true scaffold_1: 1773309-1778801 Capsella rubella
Carub.0001s0501 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1773309-1775308 Capsella rubella
Carub.0001s0501 5.0kb upstream 5.0kb upstream 8493 true scaffold_1: 1775309-1783801 Capsella rubella
Carub.0001s0501 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1778802-1783801 Capsella rubella
Carub.0001s0501 5.0kb downstream 5.0kb downstream 8493 true scaffold_1: 1770309-1778801 Capsella rubella
Carub.0001s0501 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1770309-1775308 Capsella rubella
Carub.0001s0501 10.0kb upstream 10.0kb upstream 13493 true scaffold_1: 1775309-1788801 Capsella rubella
Carub.0001s0501 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1778802-1788801 Capsella rubella
Carub.0001s0501 10.0kb downstream 10.0kb downstream 13493 true scaffold_1: 1765309-1778801 Capsella rubella
Carub.0001s0501 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1765309-1775308 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364012 5261 Brassicaceae View MSA
123829738 5264 Brassicales-Malvales View MSA
124343628 5266 SBM View MSA
124240850 5268 Malvidae View MSA
124065100 5270 Rosid View MSA
123738721 5271 Pentapetalae View MSA
122787826 5272 Eudicot View MSA
122045787 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310503 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain