Gene : Carub.0001s0781 C. rubella v1.1
Defline:  (1 of 1) PTHR10625:SF121 - HISTONE DEACETYLASE 8 Genomic Order:  781
Name:  ? Carub.0001s0781 Secondary Identifier:  ? PAC:39229880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0781 0.5kb upstream 0.5kb upstream 2673 true scaffold_1: 2750443-2753115 Capsella rubella
Carub.0001s0781 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2750443-2750942 Capsella rubella
Carub.0001s0781 0.5kb downstream 0.5kb downstream 2673 true scaffold_1: 2750943-2753615 Capsella rubella
Carub.0001s0781 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2753116-2753615 Capsella rubella
Carub.0001s0781 1.0kb upstream 1.0kb upstream 3173 true scaffold_1: 2749943-2753115 Capsella rubella
Carub.0001s0781 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2749943-2750942 Capsella rubella
Carub.0001s0781 1.0kb downstream 1.0kb downstream 3173 true scaffold_1: 2750943-2754115 Capsella rubella
Carub.0001s0781 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2753116-2754115 Capsella rubella
Carub.0001s0781 2.0kb upstream 2.0kb upstream 4173 true scaffold_1: 2748943-2753115 Capsella rubella
Carub.0001s0781 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2748943-2750942 Capsella rubella
Carub.0001s0781 2.0kb downstream 2.0kb downstream 4173 true scaffold_1: 2750943-2755115 Capsella rubella
Carub.0001s0781 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2753116-2755115 Capsella rubella
Carub.0001s0781 5.0kb upstream 5.0kb upstream 7173 true scaffold_1: 2745943-2753115 Capsella rubella
Carub.0001s0781 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2745943-2750942 Capsella rubella
Carub.0001s0781 5.0kb downstream 5.0kb downstream 7173 true scaffold_1: 2750943-2758115 Capsella rubella
Carub.0001s0781 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2753116-2758115 Capsella rubella
Carub.0001s0781 10.0kb upstream 10.0kb upstream 12173 true scaffold_1: 2740943-2753115 Capsella rubella
Carub.0001s0781 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2740943-2750942 Capsella rubella
Carub.0001s0781 10.0kb downstream 10.0kb downstream 12173 true scaffold_1: 2750943-2763115 Capsella rubella
Carub.0001s0781 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2753116-2763115 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362711 5261 Brassicaceae View MSA
123835363 5264 Brassicales-Malvales View MSA
124341397 5266 SBM View MSA
124237256 5268 Malvidae View MSA
124068185 5270 Rosid View MSA
123739606 5271 Pentapetalae View MSA
122786493 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain