Gene : Carub.0001s0785 C. rubella v1.1
Defline:  (1 of 1) 2.8.1.7//4.4.1.16 - Cysteine desulfurase / Cysteine desulfurylase // Selenocysteine lyase / Selenocysteine reductase Genomic Order:  785
Name:  ? Carub.0001s0785 Secondary Identifier:  ? PAC:39231371
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY0-1021 Capsella rubella pathologic  
Crubella PWY-6823 Capsella rubella pathologic  
Crubella PWY-7250 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0785 0.5kb upstream 0.5kb upstream 3461 true scaffold_1: 2765447-2768907 Capsella rubella
Carub.0001s0785 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2768408-2768907 Capsella rubella
Carub.0001s0785 0.5kb downstream 0.5kb downstream 3461 true scaffold_1: 2764947-2768407 Capsella rubella
Carub.0001s0785 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2764947-2765446 Capsella rubella
Carub.0001s0785 1.0kb upstream 1.0kb upstream 3961 true scaffold_1: 2765447-2769407 Capsella rubella
Carub.0001s0785 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2768408-2769407 Capsella rubella
Carub.0001s0785 1.0kb downstream 1.0kb downstream 3961 true scaffold_1: 2764447-2768407 Capsella rubella
Carub.0001s0785 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2764447-2765446 Capsella rubella
Carub.0001s0785 2.0kb upstream 2.0kb upstream 4961 true scaffold_1: 2765447-2770407 Capsella rubella
Carub.0001s0785 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2768408-2770407 Capsella rubella
Carub.0001s0785 2.0kb downstream 2.0kb downstream 4961 true scaffold_1: 2763447-2768407 Capsella rubella
Carub.0001s0785 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2763447-2765446 Capsella rubella
Carub.0001s0785 5.0kb upstream 5.0kb upstream 7961 true scaffold_1: 2765447-2773407 Capsella rubella
Carub.0001s0785 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2768408-2773407 Capsella rubella
Carub.0001s0785 5.0kb downstream 5.0kb downstream 7961 true scaffold_1: 2760447-2768407 Capsella rubella
Carub.0001s0785 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2760447-2765446 Capsella rubella
Carub.0001s0785 10.0kb upstream 10.0kb upstream 12961 true scaffold_1: 2765447-2778407 Capsella rubella
Carub.0001s0785 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2768408-2778407 Capsella rubella
Carub.0001s0785 10.0kb downstream 10.0kb downstream 12961 true scaffold_1: 2755447-2768407 Capsella rubella
Carub.0001s0785 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2755447-2765446 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372199 5261 Brassicaceae View MSA
123832892 5264 Brassicales-Malvales View MSA
124346335 5266 SBM View MSA
124238187 5268 Malvidae View MSA
124062122 5270 Rosid View MSA
123738873 5271 Pentapetalae View MSA
122791237 5272 Eudicot View MSA
122045699 5273 Angiosperm View MSA
121346585 5274 Embryophyte View MSA
123424860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain