Gene : Carub.0001s0796 C. rubella v1.1
Defline:  (1 of 1) K10779 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) Genomic Order:  796
Name:  ? Carub.0001s0796 Secondary Identifier:  ? PAC:39228074
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0796 0.5kb upstream 0.5kb upstream 10123 true scaffold_1: 2803535-2813657 Capsella rubella
Carub.0001s0796 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2803535-2804034 Capsella rubella
Carub.0001s0796 0.5kb downstream 0.5kb downstream 10123 true scaffold_1: 2804035-2814157 Capsella rubella
Carub.0001s0796 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2813658-2814157 Capsella rubella
Carub.0001s0796 1.0kb upstream 1.0kb upstream 10623 true scaffold_1: 2803035-2813657 Capsella rubella
Carub.0001s0796 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2803035-2804034 Capsella rubella
Carub.0001s0796 1.0kb downstream 1.0kb downstream 10623 true scaffold_1: 2804035-2814657 Capsella rubella
Carub.0001s0796 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2813658-2814657 Capsella rubella
Carub.0001s0796 2.0kb upstream 2.0kb upstream 11623 true scaffold_1: 2802035-2813657 Capsella rubella
Carub.0001s0796 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2802035-2804034 Capsella rubella
Carub.0001s0796 2.0kb downstream 2.0kb downstream 11623 true scaffold_1: 2804035-2815657 Capsella rubella
Carub.0001s0796 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2813658-2815657 Capsella rubella
Carub.0001s0796 5.0kb upstream 5.0kb upstream 14623 true scaffold_1: 2799035-2813657 Capsella rubella
Carub.0001s0796 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2799035-2804034 Capsella rubella
Carub.0001s0796 5.0kb downstream 5.0kb downstream 14623 true scaffold_1: 2804035-2818657 Capsella rubella
Carub.0001s0796 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2813658-2818657 Capsella rubella
Carub.0001s0796 10.0kb upstream 10.0kb upstream 19623 true scaffold_1: 2794035-2813657 Capsella rubella
Carub.0001s0796 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2794035-2804034 Capsella rubella
Carub.0001s0796 10.0kb downstream 10.0kb downstream 19623 true scaffold_1: 2804035-2823657 Capsella rubella
Carub.0001s0796 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2813658-2823657 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373021 5261 Brassicaceae View MSA
123830926 5264 Brassicales-Malvales View MSA
124343842 5266 SBM View MSA
124240013 5268 Malvidae View MSA
124061145 5270 Rosid View MSA
123747129 5271 Pentapetalae View MSA
122792246 5272 Eudicot View MSA
122043506 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain