Gene : Carub.0001s0793 C. rubella v1.1
Defline:  (1 of 2) PTHR10438//PTHR10438:SF245 - THIOREDOXIN // THIOREDOXIN-LIKE 1-1, CHLOROPLASTIC-RELATED Genomic Order:  793
Name:  ? Carub.0001s0793 Secondary Identifier:  ? PAC:39230605
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0793 0.5kb upstream 0.5kb upstream 2345 true scaffold_1: 2793397-2795741 Capsella rubella
Carub.0001s0793 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2793397-2793896 Capsella rubella
Carub.0001s0793 0.5kb downstream 0.5kb downstream 2345 true scaffold_1: 2793897-2796241 Capsella rubella
Carub.0001s0793 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2795742-2796241 Capsella rubella
Carub.0001s0793 1.0kb upstream 1.0kb upstream 2845 true scaffold_1: 2792897-2795741 Capsella rubella
Carub.0001s0793 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2792897-2793896 Capsella rubella
Carub.0001s0793 1.0kb downstream 1.0kb downstream 2845 true scaffold_1: 2793897-2796741 Capsella rubella
Carub.0001s0793 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2795742-2796741 Capsella rubella
Carub.0001s0793 2.0kb upstream 2.0kb upstream 3845 true scaffold_1: 2791897-2795741 Capsella rubella
Carub.0001s0793 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2791897-2793896 Capsella rubella
Carub.0001s0793 2.0kb downstream 2.0kb downstream 3845 true scaffold_1: 2793897-2797741 Capsella rubella
Carub.0001s0793 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2795742-2797741 Capsella rubella
Carub.0001s0793 5.0kb upstream 5.0kb upstream 6845 true scaffold_1: 2788897-2795741 Capsella rubella
Carub.0001s0793 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2788897-2793896 Capsella rubella
Carub.0001s0793 5.0kb downstream 5.0kb downstream 6845 true scaffold_1: 2793897-2800741 Capsella rubella
Carub.0001s0793 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2795742-2800741 Capsella rubella
Carub.0001s0793 10.0kb upstream 10.0kb upstream 11845 true scaffold_1: 2783897-2795741 Capsella rubella
Carub.0001s0793 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2783897-2793896 Capsella rubella
Carub.0001s0793 10.0kb downstream 10.0kb downstream 11845 true scaffold_1: 2793897-2805741 Capsella rubella
Carub.0001s0793 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2795742-2805741 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362353 5261 Brassicaceae View MSA
123837507 5264 Brassicales-Malvales View MSA
124344892 5266 SBM View MSA
124241000 5268 Malvidae View MSA
124067086 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain