Gene : Carub.0001s0417 C. rubella v1.1
Defline:  (1 of 1) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Genomic Order:  417
Name:  ? Carub.0001s0417 Secondary Identifier:  ? PAC:39227530
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0417 0.5kb upstream 0.5kb upstream 1998 true scaffold_1: 1475958-1477955 Capsella rubella
Carub.0001s0417 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1475958-1476457 Capsella rubella
Carub.0001s0417 0.5kb downstream 0.5kb downstream 1998 true scaffold_1: 1476458-1478455 Capsella rubella
Carub.0001s0417 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1477956-1478455 Capsella rubella
Carub.0001s0417 1.0kb upstream 1.0kb upstream 2498 true scaffold_1: 1475458-1477955 Capsella rubella
Carub.0001s0417 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1475458-1476457 Capsella rubella
Carub.0001s0417 1.0kb downstream 1.0kb downstream 2498 true scaffold_1: 1476458-1478955 Capsella rubella
Carub.0001s0417 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1477956-1478955 Capsella rubella
Carub.0001s0417 2.0kb upstream 2.0kb upstream 3498 true scaffold_1: 1474458-1477955 Capsella rubella
Carub.0001s0417 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1474458-1476457 Capsella rubella
Carub.0001s0417 2.0kb downstream 2.0kb downstream 3498 true scaffold_1: 1476458-1479955 Capsella rubella
Carub.0001s0417 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1477956-1479955 Capsella rubella
Carub.0001s0417 5.0kb upstream 5.0kb upstream 6498 true scaffold_1: 1471458-1477955 Capsella rubella
Carub.0001s0417 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1471458-1476457 Capsella rubella
Carub.0001s0417 5.0kb downstream 5.0kb downstream 6498 true scaffold_1: 1476458-1482955 Capsella rubella
Carub.0001s0417 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1477956-1482955 Capsella rubella
Carub.0001s0417 10.0kb upstream 10.0kb upstream 11498 true scaffold_1: 1466458-1477955 Capsella rubella
Carub.0001s0417 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1466458-1476457 Capsella rubella
Carub.0001s0417 10.0kb downstream 10.0kb downstream 11498 true scaffold_1: 1476458-1487955 Capsella rubella
Carub.0001s0417 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1477956-1487955 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374605 5261 Brassicaceae View MSA
123838750 5264 Brassicales-Malvales View MSA
124343434 5266 SBM View MSA
124252914 5268 Malvidae View MSA
124062125 5270 Rosid View MSA
123738974 5271 Pentapetalae View MSA
122790107 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain