Gene : Carub.0001s0424 C. rubella v1.1
Defline:  (1 of 2) PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Genomic Order:  424
Name:  ? Carub.0001s0424 Secondary Identifier:  ? PAC:39229235
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0424 0.5kb upstream 0.5kb upstream 3339 true scaffold_1: 1496617-1499955 Capsella rubella
Carub.0001s0424 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1499456-1499955 Capsella rubella
Carub.0001s0424 0.5kb downstream 0.5kb downstream 3339 true scaffold_1: 1496117-1499455 Capsella rubella
Carub.0001s0424 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1496117-1496616 Capsella rubella
Carub.0001s0424 1.0kb upstream 1.0kb upstream 3839 true scaffold_1: 1496617-1500455 Capsella rubella
Carub.0001s0424 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1499456-1500455 Capsella rubella
Carub.0001s0424 1.0kb downstream 1.0kb downstream 3839 true scaffold_1: 1495617-1499455 Capsella rubella
Carub.0001s0424 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1495617-1496616 Capsella rubella
Carub.0001s0424 2.0kb upstream 2.0kb upstream 4839 true scaffold_1: 1496617-1501455 Capsella rubella
Carub.0001s0424 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1499456-1501455 Capsella rubella
Carub.0001s0424 2.0kb downstream 2.0kb downstream 4839 true scaffold_1: 1494617-1499455 Capsella rubella
Carub.0001s0424 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1494617-1496616 Capsella rubella
Carub.0001s0424 5.0kb upstream 5.0kb upstream 7839 true scaffold_1: 1496617-1504455 Capsella rubella
Carub.0001s0424 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1499456-1504455 Capsella rubella
Carub.0001s0424 5.0kb downstream 5.0kb downstream 7839 true scaffold_1: 1491617-1499455 Capsella rubella
Carub.0001s0424 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1491617-1496616 Capsella rubella
Carub.0001s0424 10.0kb upstream 10.0kb upstream 12839 true scaffold_1: 1496617-1509455 Capsella rubella
Carub.0001s0424 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1499456-1509455 Capsella rubella
Carub.0001s0424 10.0kb downstream 10.0kb downstream 12839 true scaffold_1: 1486617-1499455 Capsella rubella
Carub.0001s0424 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1486617-1496616 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362451 5261 Brassicaceae View MSA
123840275 5264 Brassicales-Malvales View MSA
124337037 5266 SBM View MSA
124252146 5268 Malvidae View MSA
124063144 5270 Rosid View MSA
123743724 5271 Pentapetalae View MSA
122789792 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain