Gene : Carub.0001s0441 C. rubella v1.1
Defline:  (1 of 3) 3.4.24.85 - S2P endopeptidase / Sterol-regulatory element-binding proteins intramembrane protease Genomic Order:  441
Name:  ? Carub.0001s0441 Secondary Identifier:  ? PAC:39227325
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0441 0.5kb upstream 0.5kb upstream 1949 true scaffold_1: 1554149-1556097 Capsella rubella
Carub.0001s0441 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1554149-1554648 Capsella rubella
Carub.0001s0441 0.5kb downstream 0.5kb downstream 1949 true scaffold_1: 1554649-1556597 Capsella rubella
Carub.0001s0441 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1556098-1556597 Capsella rubella
Carub.0001s0441 1.0kb upstream 1.0kb upstream 2449 true scaffold_1: 1553649-1556097 Capsella rubella
Carub.0001s0441 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1553649-1554648 Capsella rubella
Carub.0001s0441 1.0kb downstream 1.0kb downstream 2449 true scaffold_1: 1554649-1557097 Capsella rubella
Carub.0001s0441 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1556098-1557097 Capsella rubella
Carub.0001s0441 2.0kb upstream 2.0kb upstream 3449 true scaffold_1: 1552649-1556097 Capsella rubella
Carub.0001s0441 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1552649-1554648 Capsella rubella
Carub.0001s0441 2.0kb downstream 2.0kb downstream 3449 true scaffold_1: 1554649-1558097 Capsella rubella
Carub.0001s0441 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1556098-1558097 Capsella rubella
Carub.0001s0441 5.0kb upstream 5.0kb upstream 6449 true scaffold_1: 1549649-1556097 Capsella rubella
Carub.0001s0441 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1549649-1554648 Capsella rubella
Carub.0001s0441 5.0kb downstream 5.0kb downstream 6449 true scaffold_1: 1554649-1561097 Capsella rubella
Carub.0001s0441 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1556098-1561097 Capsella rubella
Carub.0001s0441 10.0kb upstream 10.0kb upstream 11449 true scaffold_1: 1544649-1556097 Capsella rubella
Carub.0001s0441 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1544649-1554648 Capsella rubella
Carub.0001s0441 10.0kb downstream 10.0kb downstream 11449 true scaffold_1: 1554649-1566097 Capsella rubella
Carub.0001s0441 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1556098-1566097 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361531 5261 Brassicaceae View MSA
123835925 5264 Brassicales-Malvales View MSA
124346146 5266 SBM View MSA
124246459 5268 Malvidae View MSA
124063019 5270 Rosid View MSA
123739273 5271 Pentapetalae View MSA
122788607 5272 Eudicot View MSA
122044779 5273 Angiosperm View MSA
121347975 5274 Embryophyte View MSA
123424345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain