Gene : Carub.0001s0436 C. rubella v1.1
Defline:  (1 of 86) PTHR32212//PTHR32212:SF112 - FAMILY NOT NAMED // FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  436
Name:  ? Carub.0001s0436 Secondary Identifier:  ? PAC:39231073
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0436 0.5kb upstream 0.5kb upstream 2004 true scaffold_1: 1533141-1535144 Capsella rubella
Carub.0001s0436 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1533141-1533640 Capsella rubella
Carub.0001s0436 0.5kb downstream 0.5kb downstream 2004 true scaffold_1: 1533641-1535644 Capsella rubella
Carub.0001s0436 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1535145-1535644 Capsella rubella
Carub.0001s0436 1.0kb upstream 1.0kb upstream 2504 true scaffold_1: 1532641-1535144 Capsella rubella
Carub.0001s0436 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1532641-1533640 Capsella rubella
Carub.0001s0436 1.0kb downstream 1.0kb downstream 2504 true scaffold_1: 1533641-1536144 Capsella rubella
Carub.0001s0436 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1535145-1536144 Capsella rubella
Carub.0001s0436 2.0kb upstream 2.0kb upstream 3504 true scaffold_1: 1531641-1535144 Capsella rubella
Carub.0001s0436 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1531641-1533640 Capsella rubella
Carub.0001s0436 2.0kb downstream 2.0kb downstream 3504 true scaffold_1: 1533641-1537144 Capsella rubella
Carub.0001s0436 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1535145-1537144 Capsella rubella
Carub.0001s0436 5.0kb upstream 5.0kb upstream 6504 true scaffold_1: 1528641-1535144 Capsella rubella
Carub.0001s0436 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1528641-1533640 Capsella rubella
Carub.0001s0436 5.0kb downstream 5.0kb downstream 6504 true scaffold_1: 1533641-1540144 Capsella rubella
Carub.0001s0436 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1535145-1540144 Capsella rubella
Carub.0001s0436 10.0kb upstream 10.0kb upstream 11504 true scaffold_1: 1523641-1535144 Capsella rubella
Carub.0001s0436 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1523641-1533640 Capsella rubella
Carub.0001s0436 10.0kb downstream 10.0kb downstream 11504 true scaffold_1: 1533641-1545144 Capsella rubella
Carub.0001s0436 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1535145-1545144 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378296 5261 Brassicaceae View MSA
123801816 5264 Brassicales-Malvales View MSA
124299074 5266 SBM View MSA
124150576 5268 Malvidae View MSA
123876166 5270 Rosid View MSA
123459877 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain