Gene : Carub.0001s0450 C. rubella v1.1
Defline:  (1 of 7) KOG0484 - Transcription factor PHOX2/ARIX, contains HOX domain Genomic Order:  450
Name:  ? Carub.0001s0450 Secondary Identifier:  ? PAC:39227877
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0450 0.5kb upstream 0.5kb upstream 6772 true scaffold_1: 1583776-1590547 Capsella rubella
Carub.0001s0450 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1590048-1590547 Capsella rubella
Carub.0001s0450 0.5kb downstream 0.5kb downstream 6772 true scaffold_1: 1583276-1590047 Capsella rubella
Carub.0001s0450 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1583276-1583775 Capsella rubella
Carub.0001s0450 1.0kb upstream 1.0kb upstream 7272 true scaffold_1: 1583776-1591047 Capsella rubella
Carub.0001s0450 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1590048-1591047 Capsella rubella
Carub.0001s0450 1.0kb downstream 1.0kb downstream 7272 true scaffold_1: 1582776-1590047 Capsella rubella
Carub.0001s0450 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1582776-1583775 Capsella rubella
Carub.0001s0450 2.0kb upstream 2.0kb upstream 8272 true scaffold_1: 1583776-1592047 Capsella rubella
Carub.0001s0450 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1590048-1592047 Capsella rubella
Carub.0001s0450 2.0kb downstream 2.0kb downstream 8272 true scaffold_1: 1581776-1590047 Capsella rubella
Carub.0001s0450 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1581776-1583775 Capsella rubella
Carub.0001s0450 5.0kb upstream 5.0kb upstream 11272 true scaffold_1: 1583776-1595047 Capsella rubella
Carub.0001s0450 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1590048-1595047 Capsella rubella
Carub.0001s0450 5.0kb downstream 5.0kb downstream 11272 true scaffold_1: 1578776-1590047 Capsella rubella
Carub.0001s0450 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1578776-1583775 Capsella rubella
Carub.0001s0450 10.0kb upstream 10.0kb upstream 16272 true scaffold_1: 1583776-1600047 Capsella rubella
Carub.0001s0450 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1590048-1600047 Capsella rubella
Carub.0001s0450 10.0kb downstream 10.0kb downstream 16272 true scaffold_1: 1573776-1590047 Capsella rubella
Carub.0001s0450 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1573776-1583775 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377813 5261 Brassicaceae View MSA
123836464 5264 Brassicales-Malvales View MSA
124338113 5266 SBM View MSA
124238235 5268 Malvidae View MSA
124067525 5270 Rosid View MSA
123744207 5271 Pentapetalae View MSA
122795649 5272 Eudicot View MSA
122043712 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain