Gene : Carub.0006s0166 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  166
Name:  ? Carub.0006s0166 Secondary Identifier:  ? PAC:39246039
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0166 0.5kb upstream 0.5kb upstream 3826 true scaffold_6: 598722-602547 Capsella rubella
Carub.0006s0166 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 598722-599221 Capsella rubella
Carub.0006s0166 0.5kb downstream 0.5kb downstream 3826 true scaffold_6: 599222-603047 Capsella rubella
Carub.0006s0166 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 602548-603047 Capsella rubella
Carub.0006s0166 1.0kb upstream 1.0kb upstream 4326 true scaffold_6: 598222-602547 Capsella rubella
Carub.0006s0166 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 598222-599221 Capsella rubella
Carub.0006s0166 1.0kb downstream 1.0kb downstream 4326 true scaffold_6: 599222-603547 Capsella rubella
Carub.0006s0166 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 602548-603547 Capsella rubella
Carub.0006s0166 2.0kb upstream 2.0kb upstream 5326 true scaffold_6: 597222-602547 Capsella rubella
Carub.0006s0166 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 597222-599221 Capsella rubella
Carub.0006s0166 2.0kb downstream 2.0kb downstream 5326 true scaffold_6: 599222-604547 Capsella rubella
Carub.0006s0166 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 602548-604547 Capsella rubella
Carub.0006s0166 5.0kb upstream 5.0kb upstream 8326 true scaffold_6: 594222-602547 Capsella rubella
Carub.0006s0166 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 594222-599221 Capsella rubella
Carub.0006s0166 5.0kb downstream 5.0kb downstream 8326 true scaffold_6: 599222-607547 Capsella rubella
Carub.0006s0166 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 602548-607547 Capsella rubella
Carub.0006s0166 10.0kb upstream 10.0kb upstream 13326 true scaffold_6: 589222-602547 Capsella rubella
Carub.0006s0166 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 589222-599221 Capsella rubella
Carub.0006s0166 10.0kb downstream 10.0kb downstream 13326 true scaffold_6: 599222-612547 Capsella rubella
Carub.0006s0166 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 602548-612547 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367636 5261 Brassicaceae View MSA
123830512 5264 Brassicales-Malvales View MSA
124341184 5266 SBM View MSA
124244976 5268 Malvidae View MSA
124063650 5270 Rosid View MSA
123744413 5271 Pentapetalae View MSA
122789799 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain