Gene : Carub.0006s0165 C. rubella v1.1
Defline:  (1 of 1) PTHR13208:SF2 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4 Genomic Order:  165
Name:  ? Carub.0006s0165 Secondary Identifier:  ? PAC:39247324
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0165 0.5kb upstream 0.5kb upstream 2153 true scaffold_6: 596600-598752 Capsella rubella
Carub.0006s0165 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 596600-597099 Capsella rubella
Carub.0006s0165 0.5kb downstream 0.5kb downstream 2153 true scaffold_6: 597100-599252 Capsella rubella
Carub.0006s0165 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 598753-599252 Capsella rubella
Carub.0006s0165 1.0kb upstream 1.0kb upstream 2653 true scaffold_6: 596100-598752 Capsella rubella
Carub.0006s0165 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 596100-597099 Capsella rubella
Carub.0006s0165 1.0kb downstream 1.0kb downstream 2653 true scaffold_6: 597100-599752 Capsella rubella
Carub.0006s0165 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 598753-599752 Capsella rubella
Carub.0006s0165 2.0kb upstream 2.0kb upstream 3653 true scaffold_6: 595100-598752 Capsella rubella
Carub.0006s0165 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 595100-597099 Capsella rubella
Carub.0006s0165 2.0kb downstream 2.0kb downstream 3653 true scaffold_6: 597100-600752 Capsella rubella
Carub.0006s0165 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 598753-600752 Capsella rubella
Carub.0006s0165 5.0kb upstream 5.0kb upstream 6653 true scaffold_6: 592100-598752 Capsella rubella
Carub.0006s0165 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 592100-597099 Capsella rubella
Carub.0006s0165 5.0kb downstream 5.0kb downstream 6653 true scaffold_6: 597100-603752 Capsella rubella
Carub.0006s0165 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 598753-603752 Capsella rubella
Carub.0006s0165 10.0kb upstream 10.0kb upstream 11653 true scaffold_6: 587100-598752 Capsella rubella
Carub.0006s0165 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 587100-597099 Capsella rubella
Carub.0006s0165 10.0kb downstream 10.0kb downstream 11653 true scaffold_6: 597100-608752 Capsella rubella
Carub.0006s0165 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 598753-608752 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366470 5261 Brassicaceae View MSA
123835831 5264 Brassicales-Malvales View MSA
124339475 5266 SBM View MSA
124243526 5268 Malvidae View MSA
124063104 5270 Rosid View MSA
123737443 5271 Pentapetalae View MSA
122786979 5272 Eudicot View MSA
122042269 5273 Angiosperm View MSA
121345208 5274 Embryophyte View MSA
123380175 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain