Gene : Carub.0001s0493 C. rubella v1.1
Defline:  (1 of 29) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  493
Name:  ? Carub.0001s0493 Secondary Identifier:  ? PAC:39226944
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0493 0.5kb upstream 0.5kb upstream 2402 true scaffold_1: 1751009-1753410 Capsella rubella
Carub.0001s0493 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1751009-1751508 Capsella rubella
Carub.0001s0493 0.5kb downstream 0.5kb downstream 2402 true scaffold_1: 1751509-1753910 Capsella rubella
Carub.0001s0493 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1753411-1753910 Capsella rubella
Carub.0001s0493 1.0kb upstream 1.0kb upstream 2902 true scaffold_1: 1750509-1753410 Capsella rubella
Carub.0001s0493 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1750509-1751508 Capsella rubella
Carub.0001s0493 1.0kb downstream 1.0kb downstream 2902 true scaffold_1: 1751509-1754410 Capsella rubella
Carub.0001s0493 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1753411-1754410 Capsella rubella
Carub.0001s0493 2.0kb upstream 2.0kb upstream 3902 true scaffold_1: 1749509-1753410 Capsella rubella
Carub.0001s0493 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1749509-1751508 Capsella rubella
Carub.0001s0493 2.0kb downstream 2.0kb downstream 3902 true scaffold_1: 1751509-1755410 Capsella rubella
Carub.0001s0493 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1753411-1755410 Capsella rubella
Carub.0001s0493 5.0kb upstream 5.0kb upstream 6902 true scaffold_1: 1746509-1753410 Capsella rubella
Carub.0001s0493 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1746509-1751508 Capsella rubella
Carub.0001s0493 5.0kb downstream 5.0kb downstream 6902 true scaffold_1: 1751509-1758410 Capsella rubella
Carub.0001s0493 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1753411-1758410 Capsella rubella
Carub.0001s0493 10.0kb upstream 10.0kb upstream 11902 true scaffold_1: 1741509-1753410 Capsella rubella
Carub.0001s0493 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1741509-1751508 Capsella rubella
Carub.0001s0493 10.0kb downstream 10.0kb downstream 11902 true scaffold_1: 1751509-1763410 Capsella rubella
Carub.0001s0493 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1753411-1763410 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370524 5261 Brassicaceae View MSA
123827733 5264 Brassicales-Malvales View MSA
124336556 5266 SBM View MSA
124240267 5268 Malvidae View MSA
124065853 5270 Rosid View MSA
123740694 5271 Pentapetalae View MSA
122786557 5272 Eudicot View MSA
122042535 5273 Angiosperm View MSA
121309984 5274 Embryophyte View MSA
123347596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain