Gene : Carub.0006s0452 C. rubella v1.1
Defline:  (1 of 2) K10389 - tubulin gamma (TUBG) Genomic Order:  452
Name:  ? Carub.0006s0452 Secondary Identifier:  ? PAC:39248665
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5695 Capsella rubella pathologic  
Crubella PWY-6608 Capsella rubella pathologic  
Crubella PWY-6609 Capsella rubella pathologic  
Crubella PWY-7179 Capsella rubella pathologic  
Crubella SALVADEHYPOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0452 0.5kb upstream 0.5kb upstream 3453 true scaffold_6: 1654604-1658056 Capsella rubella
Carub.0006s0452 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1654604-1655103 Capsella rubella
Carub.0006s0452 0.5kb downstream 0.5kb downstream 3453 true scaffold_6: 1655104-1658556 Capsella rubella
Carub.0006s0452 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1658057-1658556 Capsella rubella
Carub.0006s0452 1.0kb upstream 1.0kb upstream 3953 true scaffold_6: 1654104-1658056 Capsella rubella
Carub.0006s0452 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1654104-1655103 Capsella rubella
Carub.0006s0452 1.0kb downstream 1.0kb downstream 3953 true scaffold_6: 1655104-1659056 Capsella rubella
Carub.0006s0452 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1658057-1659056 Capsella rubella
Carub.0006s0452 2.0kb upstream 2.0kb upstream 4953 true scaffold_6: 1653104-1658056 Capsella rubella
Carub.0006s0452 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1653104-1655103 Capsella rubella
Carub.0006s0452 2.0kb downstream 2.0kb downstream 4953 true scaffold_6: 1655104-1660056 Capsella rubella
Carub.0006s0452 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1658057-1660056 Capsella rubella
Carub.0006s0452 5.0kb upstream 5.0kb upstream 7953 true scaffold_6: 1650104-1658056 Capsella rubella
Carub.0006s0452 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1650104-1655103 Capsella rubella
Carub.0006s0452 5.0kb downstream 5.0kb downstream 7953 true scaffold_6: 1655104-1663056 Capsella rubella
Carub.0006s0452 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1658057-1663056 Capsella rubella
Carub.0006s0452 10.0kb upstream 10.0kb upstream 12953 true scaffold_6: 1645104-1658056 Capsella rubella
Carub.0006s0452 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1645104-1655103 Capsella rubella
Carub.0006s0452 10.0kb downstream 10.0kb downstream 12953 true scaffold_6: 1655104-1668056 Capsella rubella
Carub.0006s0452 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1658057-1668056 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain