Gene : Carub.0006s0448 C. rubella v1.1

Defline:  (1 of 3) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Genomic Order:  448
Name:  ? Carub.0006s0448 Secondary Identifier:  ? PAC:39246173

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0448 0.5kb upstream 0.5kb upstream 2439 true scaffold_6: 1638481-1640919 Capsella rubella
Carub.0006s0448 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1638481-1638980 Capsella rubella
Carub.0006s0448 0.5kb downstream 0.5kb downstream 2439 true scaffold_6: 1638981-1641419 Capsella rubella
Carub.0006s0448 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1640920-1641419 Capsella rubella
Carub.0006s0448 1.0kb upstream 1.0kb upstream 2939 true scaffold_6: 1637981-1640919 Capsella rubella
Carub.0006s0448 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1637981-1638980 Capsella rubella
Carub.0006s0448 1.0kb downstream 1.0kb downstream 2939 true scaffold_6: 1638981-1641919 Capsella rubella
Carub.0006s0448 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1640920-1641919 Capsella rubella
Carub.0006s0448 2.0kb upstream 2.0kb upstream 3939 true scaffold_6: 1636981-1640919 Capsella rubella
Carub.0006s0448 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1636981-1638980 Capsella rubella
Carub.0006s0448 2.0kb downstream 2.0kb downstream 3939 true scaffold_6: 1638981-1642919 Capsella rubella
Carub.0006s0448 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1640920-1642919 Capsella rubella
Carub.0006s0448 5.0kb upstream 5.0kb upstream 6939 true scaffold_6: 1633981-1640919 Capsella rubella
Carub.0006s0448 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1633981-1638980 Capsella rubella
Carub.0006s0448 5.0kb downstream 5.0kb downstream 6939 true scaffold_6: 1638981-1645919 Capsella rubella
Carub.0006s0448 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1640920-1645919 Capsella rubella
Carub.0006s0448 10.0kb upstream 10.0kb upstream 11939 true scaffold_6: 1628981-1640919 Capsella rubella
Carub.0006s0448 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1628981-1638980 Capsella rubella
Carub.0006s0448 10.0kb downstream 10.0kb downstream 11939 true scaffold_6: 1638981-1650919 Capsella rubella
Carub.0006s0448 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1640920-1650919 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372039 5261 Brassicaceae View MSA
123838789 5264 Brassicales-Malvales View MSA
124338417 5266 SBM View MSA
124240620 5268 Malvidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain