Gene : Carub.0006s0509 C. rubella v1.1
Defline:  (1 of 2) PTHR14009//PTHR14009:SF9 - LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN // LETM1-LIKE PROTEIN Genomic Order:  509
Name:  ? Carub.0006s0509 Secondary Identifier:  ? PAC:39246345
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0509 0.5kb upstream 0.5kb upstream 6850 true scaffold_6: 1864158-1871007 Capsella rubella
Carub.0006s0509 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1864158-1864657 Capsella rubella
Carub.0006s0509 0.5kb downstream 0.5kb downstream 6850 true scaffold_6: 1864658-1871507 Capsella rubella
Carub.0006s0509 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1871008-1871507 Capsella rubella
Carub.0006s0509 1.0kb upstream 1.0kb upstream 7350 true scaffold_6: 1863658-1871007 Capsella rubella
Carub.0006s0509 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1863658-1864657 Capsella rubella
Carub.0006s0509 1.0kb downstream 1.0kb downstream 7350 true scaffold_6: 1864658-1872007 Capsella rubella
Carub.0006s0509 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1871008-1872007 Capsella rubella
Carub.0006s0509 2.0kb upstream 2.0kb upstream 8350 true scaffold_6: 1862658-1871007 Capsella rubella
Carub.0006s0509 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1862658-1864657 Capsella rubella
Carub.0006s0509 2.0kb downstream 2.0kb downstream 8350 true scaffold_6: 1864658-1873007 Capsella rubella
Carub.0006s0509 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1871008-1873007 Capsella rubella
Carub.0006s0509 5.0kb upstream 5.0kb upstream 11350 true scaffold_6: 1859658-1871007 Capsella rubella
Carub.0006s0509 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1859658-1864657 Capsella rubella
Carub.0006s0509 5.0kb downstream 5.0kb downstream 11350 true scaffold_6: 1864658-1876007 Capsella rubella
Carub.0006s0509 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1871008-1876007 Capsella rubella
Carub.0006s0509 10.0kb upstream 10.0kb upstream 16350 true scaffold_6: 1854658-1871007 Capsella rubella
Carub.0006s0509 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1854658-1864657 Capsella rubella
Carub.0006s0509 10.0kb downstream 10.0kb downstream 16350 true scaffold_6: 1864658-1881007 Capsella rubella
Carub.0006s0509 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1871008-1881007 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374069 5261 Brassicaceae View MSA
123837098 5264 Brassicales-Malvales View MSA
124338859 5266 SBM View MSA
124237079 5268 Malvidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain