Gene : Carub.0006s0502 C. rubella v1.1

Defline:  (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) Genomic Order:  502
Name:  ? Carub.0006s0502 Secondary Identifier:  ? PAC:39247339

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0502 0.5kb upstream 0.5kb upstream 3847 true scaffold_6: 1843575-1847421 Capsella rubella
Carub.0006s0502 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1846922-1847421 Capsella rubella
Carub.0006s0502 0.5kb downstream 0.5kb downstream 3847 true scaffold_6: 1843075-1846921 Capsella rubella
Carub.0006s0502 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1843075-1843574 Capsella rubella
Carub.0006s0502 1.0kb upstream 1.0kb upstream 4347 true scaffold_6: 1843575-1847921 Capsella rubella
Carub.0006s0502 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1846922-1847921 Capsella rubella
Carub.0006s0502 1.0kb downstream 1.0kb downstream 4347 true scaffold_6: 1842575-1846921 Capsella rubella
Carub.0006s0502 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1842575-1843574 Capsella rubella
Carub.0006s0502 2.0kb upstream 2.0kb upstream 5347 true scaffold_6: 1843575-1848921 Capsella rubella
Carub.0006s0502 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1846922-1848921 Capsella rubella
Carub.0006s0502 2.0kb downstream 2.0kb downstream 5347 true scaffold_6: 1841575-1846921 Capsella rubella
Carub.0006s0502 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1841575-1843574 Capsella rubella
Carub.0006s0502 5.0kb upstream 5.0kb upstream 8347 true scaffold_6: 1843575-1851921 Capsella rubella
Carub.0006s0502 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1846922-1851921 Capsella rubella
Carub.0006s0502 5.0kb downstream 5.0kb downstream 8347 true scaffold_6: 1838575-1846921 Capsella rubella
Carub.0006s0502 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1838575-1843574 Capsella rubella
Carub.0006s0502 10.0kb upstream 10.0kb upstream 13347 true scaffold_6: 1843575-1856921 Capsella rubella
Carub.0006s0502 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1846922-1856921 Capsella rubella
Carub.0006s0502 10.0kb downstream 10.0kb downstream 13347 true scaffold_6: 1833575-1846921 Capsella rubella
Carub.0006s0502 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1833575-1843574 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363824 5261 Brassicaceae View MSA
123829702 5264 Brassicales-Malvales View MSA
124339963 5266 SBM View MSA
124238057 5268 Malvidae View MSA
124066249 5270 Rosid View MSA
123741756 5271 Pentapetalae View MSA
122792565 5272 Eudicot View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain