Gene : Carub.0006s0545 C. rubella v1.1
Defline:  (1 of 1) PTHR23024:SF102 - CARBOXYLESTERASE 15-RELATED Genomic Order:  545
Name:  ? Carub.0006s0545 Secondary Identifier:  ? PAC:39247463
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6303 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0545 0.5kb upstream 0.5kb upstream 3201 true scaffold_6: 1998408-2001608 Capsella rubella
Carub.0006s0545 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2001109-2001608 Capsella rubella
Carub.0006s0545 0.5kb downstream 0.5kb downstream 3201 true scaffold_6: 1997908-2001108 Capsella rubella
Carub.0006s0545 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1997908-1998407 Capsella rubella
Carub.0006s0545 1.0kb upstream 1.0kb upstream 3701 true scaffold_6: 1998408-2002108 Capsella rubella
Carub.0006s0545 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2001109-2002108 Capsella rubella
Carub.0006s0545 1.0kb downstream 1.0kb downstream 3701 true scaffold_6: 1997408-2001108 Capsella rubella
Carub.0006s0545 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1997408-1998407 Capsella rubella
Carub.0006s0545 2.0kb upstream 2.0kb upstream 4701 true scaffold_6: 1998408-2003108 Capsella rubella
Carub.0006s0545 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2001109-2003108 Capsella rubella
Carub.0006s0545 2.0kb downstream 2.0kb downstream 4701 true scaffold_6: 1996408-2001108 Capsella rubella
Carub.0006s0545 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1996408-1998407 Capsella rubella
Carub.0006s0545 5.0kb upstream 5.0kb upstream 7701 true scaffold_6: 1998408-2006108 Capsella rubella
Carub.0006s0545 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2001109-2006108 Capsella rubella
Carub.0006s0545 5.0kb downstream 5.0kb downstream 7701 true scaffold_6: 1993408-2001108 Capsella rubella
Carub.0006s0545 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1993408-1998407 Capsella rubella
Carub.0006s0545 10.0kb upstream 10.0kb upstream 12701 true scaffold_6: 1998408-2011108 Capsella rubella
Carub.0006s0545 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2001109-2011108 Capsella rubella
Carub.0006s0545 10.0kb downstream 10.0kb downstream 12701 true scaffold_6: 1988408-2001108 Capsella rubella
Carub.0006s0545 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1988408-1998407 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365273 5261 Brassicaceae View MSA
123837932 5264 Brassicales-Malvales View MSA
124346718 5266 SBM View MSA
124238145 5268 Malvidae View MSA
124067556 5270 Rosid View MSA
123751656 5271 Pentapetalae View MSA
122793188 5272 Eudicot View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain