Gene : Carub.0006s0327 C. rubella v1.1
Defline:  (1 of 2) PTHR34373:SF2 - SHUGOSHIN C TERMINUS Genomic Order:  327
Name:  ? Carub.0006s0327 Secondary Identifier:  ? PAC:39247376
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0327 0.5kb upstream 0.5kb upstream 4007 true scaffold_6: 1197630-1201636 Capsella rubella
Carub.0006s0327 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1197630-1198129 Capsella rubella
Carub.0006s0327 0.5kb downstream 0.5kb downstream 4007 true scaffold_6: 1198130-1202136 Capsella rubella
Carub.0006s0327 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1201637-1202136 Capsella rubella
Carub.0006s0327 1.0kb upstream 1.0kb upstream 4507 true scaffold_6: 1197130-1201636 Capsella rubella
Carub.0006s0327 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1197130-1198129 Capsella rubella
Carub.0006s0327 1.0kb downstream 1.0kb downstream 4507 true scaffold_6: 1198130-1202636 Capsella rubella
Carub.0006s0327 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1201637-1202636 Capsella rubella
Carub.0006s0327 2.0kb upstream 2.0kb upstream 5507 true scaffold_6: 1196130-1201636 Capsella rubella
Carub.0006s0327 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1196130-1198129 Capsella rubella
Carub.0006s0327 2.0kb downstream 2.0kb downstream 5507 true scaffold_6: 1198130-1203636 Capsella rubella
Carub.0006s0327 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1201637-1203636 Capsella rubella
Carub.0006s0327 5.0kb upstream 5.0kb upstream 8507 true scaffold_6: 1193130-1201636 Capsella rubella
Carub.0006s0327 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1193130-1198129 Capsella rubella
Carub.0006s0327 5.0kb downstream 5.0kb downstream 8507 true scaffold_6: 1198130-1206636 Capsella rubella
Carub.0006s0327 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1201637-1206636 Capsella rubella
Carub.0006s0327 10.0kb upstream 10.0kb upstream 13507 true scaffold_6: 1188130-1201636 Capsella rubella
Carub.0006s0327 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1188130-1198129 Capsella rubella
Carub.0006s0327 10.0kb downstream 10.0kb downstream 13507 true scaffold_6: 1198130-1211636 Capsella rubella
Carub.0006s0327 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1201637-1211636 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122371374 5261 Brassicaceae View MSA
123838720 5264 Brassicales-Malvales View MSA
124322493 5266 SBM View MSA
124250251 5268 Malvidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain