Gene : Carub.0006s0313 C. rubella v1.1
Defline:  (1 of 4) PTHR18952//PTHR18952:SF111 - CARBONIC ANHYDRASE // ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  313
Name:  ? Carub.0006s0313 Secondary Identifier:  ? PAC:39246455
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CYANCAT-PWY Capsella rubella pathologic  
Crubella PWY-241 Capsella rubella pathologic  
Crubella PWY-7115 Capsella rubella pathologic  
Crubella PWY-7117 Capsella rubella pathologic  
Crubella PWYQT-4429 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0313 0.5kb upstream 0.5kb upstream 2067 true scaffold_6: 1140774-1142840 Capsella rubella
Carub.0006s0313 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1142341-1142840 Capsella rubella
Carub.0006s0313 0.5kb downstream 0.5kb downstream 2067 true scaffold_6: 1140274-1142340 Capsella rubella
Carub.0006s0313 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1140274-1140773 Capsella rubella
Carub.0006s0313 1.0kb upstream 1.0kb upstream 2567 true scaffold_6: 1140774-1143340 Capsella rubella
Carub.0006s0313 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1142341-1143340 Capsella rubella
Carub.0006s0313 1.0kb downstream 1.0kb downstream 2567 true scaffold_6: 1139774-1142340 Capsella rubella
Carub.0006s0313 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1139774-1140773 Capsella rubella
Carub.0006s0313 2.0kb upstream 2.0kb upstream 3567 true scaffold_6: 1140774-1144340 Capsella rubella
Carub.0006s0313 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1142341-1144340 Capsella rubella
Carub.0006s0313 2.0kb downstream 2.0kb downstream 3567 true scaffold_6: 1138774-1142340 Capsella rubella
Carub.0006s0313 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1138774-1140773 Capsella rubella
Carub.0006s0313 5.0kb upstream 5.0kb upstream 6567 true scaffold_6: 1140774-1147340 Capsella rubella
Carub.0006s0313 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1142341-1147340 Capsella rubella
Carub.0006s0313 5.0kb downstream 5.0kb downstream 6567 true scaffold_6: 1135774-1142340 Capsella rubella
Carub.0006s0313 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1135774-1140773 Capsella rubella
Carub.0006s0313 10.0kb upstream 10.0kb upstream 11567 true scaffold_6: 1140774-1152340 Capsella rubella
Carub.0006s0313 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1142341-1152340 Capsella rubella
Carub.0006s0313 10.0kb downstream 10.0kb downstream 11567 true scaffold_6: 1130774-1142340 Capsella rubella
Carub.0006s0313 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1130774-1140773 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510291 5273 Angiosperm View MSA
122361579 5261 Brassicaceae View MSA
123798204 5264 Brassicales-Malvales View MSA
124295875 5266 SBM View MSA
124148192 5268 Malvidae View MSA
123874239 5270 Rosid View MSA
123458243 5271 Pentapetalae View MSA
122493651 5272 Eudicot View MSA
120783396 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain