Gene : Carub.0006s0348 C. rubella v1.1
Defline:  (1 of 2) 3.1.3.64//3.1.3.95 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase // Phosphatidylinositol-3,5-bisphosphate 3-phosphatase / PtdIns-3,5-P(2) 3-Ptase Genomic Order:  348
Name:  ? Carub.0006s0348 Secondary Identifier:  ? PAC:39248402
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6367 Capsella rubella pathologic  
Crubella PWY-6368 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0348 0.5kb upstream 0.5kb upstream 6615 true scaffold_6: 1279372-1285986 Capsella rubella
Carub.0006s0348 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1285487-1285986 Capsella rubella
Carub.0006s0348 0.5kb downstream 0.5kb downstream 6615 true scaffold_6: 1278872-1285486 Capsella rubella
Carub.0006s0348 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1278872-1279371 Capsella rubella
Carub.0006s0348 1.0kb upstream 1.0kb upstream 7115 true scaffold_6: 1279372-1286486 Capsella rubella
Carub.0006s0348 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1285487-1286486 Capsella rubella
Carub.0006s0348 1.0kb downstream 1.0kb downstream 7115 true scaffold_6: 1278372-1285486 Capsella rubella
Carub.0006s0348 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1278372-1279371 Capsella rubella
Carub.0006s0348 2.0kb upstream 2.0kb upstream 8115 true scaffold_6: 1279372-1287486 Capsella rubella
Carub.0006s0348 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1285487-1287486 Capsella rubella
Carub.0006s0348 2.0kb downstream 2.0kb downstream 8115 true scaffold_6: 1277372-1285486 Capsella rubella
Carub.0006s0348 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1277372-1279371 Capsella rubella
Carub.0006s0348 5.0kb upstream 5.0kb upstream 11115 true scaffold_6: 1279372-1290486 Capsella rubella
Carub.0006s0348 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1285487-1290486 Capsella rubella
Carub.0006s0348 5.0kb downstream 5.0kb downstream 11115 true scaffold_6: 1274372-1285486 Capsella rubella
Carub.0006s0348 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1274372-1279371 Capsella rubella
Carub.0006s0348 10.0kb upstream 10.0kb upstream 16115 true scaffold_6: 1279372-1295486 Capsella rubella
Carub.0006s0348 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1285487-1295486 Capsella rubella
Carub.0006s0348 10.0kb downstream 10.0kb downstream 16115 true scaffold_6: 1269372-1285486 Capsella rubella
Carub.0006s0348 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1269372-1279371 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510517 5273 Angiosperm View MSA
122364850 5261 Brassicaceae View MSA
123798848 5264 Brassicales-Malvales View MSA
124296431 5266 SBM View MSA
124148586 5268 Malvidae View MSA
123874552 5270 Rosid View MSA
123458508 5271 Pentapetalae View MSA
122493913 5272 Eudicot View MSA
120783613 5274 Embryophyte View MSA
122825605 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain