Gene : Carub.0006s0410 C. rubella v1.1
Defline:  (1 of 2) PTHR13301//PTHR13301:SF64 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  410
Name:  ? Carub.0006s0410 Secondary Identifier:  ? PAC:39249564
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1001 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0410 0.5kb upstream 0.5kb upstream 5813 true scaffold_6: 1509095-1514907 Capsella rubella
Carub.0006s0410 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1514408-1514907 Capsella rubella
Carub.0006s0410 0.5kb downstream 0.5kb downstream 5813 true scaffold_6: 1508595-1514407 Capsella rubella
Carub.0006s0410 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1508595-1509094 Capsella rubella
Carub.0006s0410 1.0kb upstream 1.0kb upstream 6313 true scaffold_6: 1509095-1515407 Capsella rubella
Carub.0006s0410 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1514408-1515407 Capsella rubella
Carub.0006s0410 1.0kb downstream 1.0kb downstream 6313 true scaffold_6: 1508095-1514407 Capsella rubella
Carub.0006s0410 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1508095-1509094 Capsella rubella
Carub.0006s0410 2.0kb upstream 2.0kb upstream 7313 true scaffold_6: 1509095-1516407 Capsella rubella
Carub.0006s0410 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1514408-1516407 Capsella rubella
Carub.0006s0410 2.0kb downstream 2.0kb downstream 7313 true scaffold_6: 1507095-1514407 Capsella rubella
Carub.0006s0410 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1507095-1509094 Capsella rubella
Carub.0006s0410 5.0kb upstream 5.0kb upstream 10313 true scaffold_6: 1509095-1519407 Capsella rubella
Carub.0006s0410 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1514408-1519407 Capsella rubella
Carub.0006s0410 5.0kb downstream 5.0kb downstream 10313 true scaffold_6: 1504095-1514407 Capsella rubella
Carub.0006s0410 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1504095-1509094 Capsella rubella
Carub.0006s0410 10.0kb upstream 10.0kb upstream 15313 true scaffold_6: 1509095-1524407 Capsella rubella
Carub.0006s0410 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1514408-1524407 Capsella rubella
Carub.0006s0410 10.0kb downstream 10.0kb downstream 15313 true scaffold_6: 1499095-1514407 Capsella rubella
Carub.0006s0410 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1499095-1509094 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366565 5261 Brassicaceae View MSA
123829715 5264 Brassicales-Malvales View MSA
124350218 5266 SBM View MSA
124240162 5268 Malvidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain