Gene : Carub.0006s0440 C. rubella v1.1
Defline:  (1 of 30) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  440
Name:  ? Carub.0006s0440 Secondary Identifier:  ? PAC:39249425
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0440 0.5kb upstream 0.5kb upstream 1052 true scaffold_6: 1605231-1606282 Capsella rubella
Carub.0006s0440 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1605231-1605730 Capsella rubella
Carub.0006s0440 0.5kb downstream 0.5kb downstream 1052 true scaffold_6: 1605731-1606782 Capsella rubella
Carub.0006s0440 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1606283-1606782 Capsella rubella
Carub.0006s0440 1.0kb upstream 1.0kb upstream 1552 true scaffold_6: 1604731-1606282 Capsella rubella
Carub.0006s0440 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1604731-1605730 Capsella rubella
Carub.0006s0440 1.0kb downstream 1.0kb downstream 1552 true scaffold_6: 1605731-1607282 Capsella rubella
Carub.0006s0440 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1606283-1607282 Capsella rubella
Carub.0006s0440 2.0kb upstream 2.0kb upstream 2552 true scaffold_6: 1603731-1606282 Capsella rubella
Carub.0006s0440 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1603731-1605730 Capsella rubella
Carub.0006s0440 2.0kb downstream 2.0kb downstream 2552 true scaffold_6: 1605731-1608282 Capsella rubella
Carub.0006s0440 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1606283-1608282 Capsella rubella
Carub.0006s0440 5.0kb upstream 5.0kb upstream 5552 true scaffold_6: 1600731-1606282 Capsella rubella
Carub.0006s0440 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1600731-1605730 Capsella rubella
Carub.0006s0440 5.0kb downstream 5.0kb downstream 5552 true scaffold_6: 1605731-1611282 Capsella rubella
Carub.0006s0440 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1606283-1611282 Capsella rubella
Carub.0006s0440 10.0kb upstream 10.0kb upstream 10552 true scaffold_6: 1595731-1606282 Capsella rubella
Carub.0006s0440 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1595731-1605730 Capsella rubella
Carub.0006s0440 10.0kb downstream 10.0kb downstream 10552 true scaffold_6: 1605731-1616282 Capsella rubella
Carub.0006s0440 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1606283-1616282 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371467 5261 Brassicaceae View MSA
123830475 5264 Brassicales-Malvales View MSA
124344888 5266 SBM View MSA
124251435 5268 Malvidae View MSA
124072733 5270 Rosid View MSA
123745578 5271 Pentapetalae View MSA
122796386 5272 Eudicot View MSA
122047345 5273 Angiosperm View MSA
121310733 5274 Embryophyte View MSA
123348146 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain