Gene : Carub.0006s0435 C. rubella v1.1
Defline:  (1 of 2) K14809 - ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13] (DDX55, SPB4) Genomic Order:  435
Name:  ? Carub.0006s0435 Secondary Identifier:  ? PAC:39248947
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0435 0.5kb upstream 0.5kb upstream 3799 true scaffold_6: 1585576-1589374 Capsella rubella
Carub.0006s0435 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1585576-1586075 Capsella rubella
Carub.0006s0435 0.5kb downstream 0.5kb downstream 3799 true scaffold_6: 1586076-1589874 Capsella rubella
Carub.0006s0435 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1589375-1589874 Capsella rubella
Carub.0006s0435 1.0kb upstream 1.0kb upstream 4299 true scaffold_6: 1585076-1589374 Capsella rubella
Carub.0006s0435 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1585076-1586075 Capsella rubella
Carub.0006s0435 1.0kb downstream 1.0kb downstream 4299 true scaffold_6: 1586076-1590374 Capsella rubella
Carub.0006s0435 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1589375-1590374 Capsella rubella
Carub.0006s0435 2.0kb upstream 2.0kb upstream 5299 true scaffold_6: 1584076-1589374 Capsella rubella
Carub.0006s0435 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1584076-1586075 Capsella rubella
Carub.0006s0435 2.0kb downstream 2.0kb downstream 5299 true scaffold_6: 1586076-1591374 Capsella rubella
Carub.0006s0435 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1589375-1591374 Capsella rubella
Carub.0006s0435 5.0kb upstream 5.0kb upstream 8299 true scaffold_6: 1581076-1589374 Capsella rubella
Carub.0006s0435 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1581076-1586075 Capsella rubella
Carub.0006s0435 5.0kb downstream 5.0kb downstream 8299 true scaffold_6: 1586076-1594374 Capsella rubella
Carub.0006s0435 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1589375-1594374 Capsella rubella
Carub.0006s0435 10.0kb upstream 10.0kb upstream 13299 true scaffold_6: 1576076-1589374 Capsella rubella
Carub.0006s0435 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1576076-1586075 Capsella rubella
Carub.0006s0435 10.0kb downstream 10.0kb downstream 13299 true scaffold_6: 1586076-1599374 Capsella rubella
Carub.0006s0435 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1589375-1599374 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373167 5261 Brassicaceae View MSA
123830006 5264 Brassicales-Malvales View MSA
124339967 5266 SBM View MSA
124243555 5268 Malvidae View MSA
124068016 5270 Rosid View MSA
123739491 5271 Pentapetalae View MSA
122792074 5272 Eudicot View MSA
122042767 5273 Angiosperm View MSA
123429160 5275 Viridiplantae View MSA
121346858 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain