Gene : Carub.0008s1847 C. rubella v1.1
Defline:  (1 of 3) PTHR10217:SF500 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 5-RELATED Genomic Order:  1847
Name:  ? Carub.0008s1847 Secondary Identifier:  ? PAC:39253059
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1847 0.5kb upstream 0.5kb upstream 4648 true scaffold_8: 9634646-9639293 Capsella rubella
Carub.0008s1847 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9634646-9635145 Capsella rubella
Carub.0008s1847 0.5kb downstream 0.5kb downstream 4648 true scaffold_8: 9635146-9639793 Capsella rubella
Carub.0008s1847 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9639294-9639793 Capsella rubella
Carub.0008s1847 1.0kb upstream 1.0kb upstream 5148 true scaffold_8: 9634146-9639293 Capsella rubella
Carub.0008s1847 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9634146-9635145 Capsella rubella
Carub.0008s1847 1.0kb downstream 1.0kb downstream 5148 true scaffold_8: 9635146-9640293 Capsella rubella
Carub.0008s1847 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9639294-9640293 Capsella rubella
Carub.0008s1847 2.0kb upstream 2.0kb upstream 6148 true scaffold_8: 9633146-9639293 Capsella rubella
Carub.0008s1847 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9633146-9635145 Capsella rubella
Carub.0008s1847 2.0kb downstream 2.0kb downstream 6148 true scaffold_8: 9635146-9641293 Capsella rubella
Carub.0008s1847 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9639294-9641293 Capsella rubella
Carub.0008s1847 5.0kb upstream 5.0kb upstream 9148 true scaffold_8: 9630146-9639293 Capsella rubella
Carub.0008s1847 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9630146-9635145 Capsella rubella
Carub.0008s1847 5.0kb downstream 5.0kb downstream 9148 true scaffold_8: 9635146-9644293 Capsella rubella
Carub.0008s1847 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9639294-9644293 Capsella rubella
Carub.0008s1847 10.0kb upstream 10.0kb upstream 14148 true scaffold_8: 9625146-9639293 Capsella rubella
Carub.0008s1847 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9625146-9635145 Capsella rubella
Carub.0008s1847 10.0kb downstream 10.0kb downstream 14148 true scaffold_8: 9635146-9649293 Capsella rubella
Carub.0008s1847 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9639294-9649293 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368736 5261 Brassicaceae View MSA
123838006 5264 Brassicales-Malvales View MSA
124340121 5266 SBM View MSA
124238344 5268 Malvidae View MSA
124064062 5270 Rosid View MSA
123748998 5271 Pentapetalae View MSA
122786679 5272 Eudicot View MSA
122043565 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain