Gene : Carub.0008s2258 C. rubella v1.1
Defline:  (1 of 3) PTHR10857//PTHR10857:SF26 - COPINE // PROTEIN BONZAI 3 Genomic Order:  2258
Name:  ? Carub.0008s2258 Secondary Identifier:  ? PAC:39252194
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2258 0.5kb upstream 0.5kb upstream 4090 true scaffold_8: 11138448-11142537 Capsella rubella
Carub.0008s2258 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11142038-11142537 Capsella rubella
Carub.0008s2258 0.5kb downstream 0.5kb downstream 4090 true scaffold_8: 11137948-11142037 Capsella rubella
Carub.0008s2258 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11137948-11138447 Capsella rubella
Carub.0008s2258 1.0kb upstream 1.0kb upstream 4590 true scaffold_8: 11138448-11143037 Capsella rubella
Carub.0008s2258 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11142038-11143037 Capsella rubella
Carub.0008s2258 1.0kb downstream 1.0kb downstream 4590 true scaffold_8: 11137448-11142037 Capsella rubella
Carub.0008s2258 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11137448-11138447 Capsella rubella
Carub.0008s2258 2.0kb upstream 2.0kb upstream 5590 true scaffold_8: 11138448-11144037 Capsella rubella
Carub.0008s2258 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11142038-11144037 Capsella rubella
Carub.0008s2258 2.0kb downstream 2.0kb downstream 5590 true scaffold_8: 11136448-11142037 Capsella rubella
Carub.0008s2258 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11136448-11138447 Capsella rubella
Carub.0008s2258 5.0kb upstream 5.0kb upstream 8590 true scaffold_8: 11138448-11147037 Capsella rubella
Carub.0008s2258 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11142038-11147037 Capsella rubella
Carub.0008s2258 5.0kb downstream 5.0kb downstream 8590 true scaffold_8: 11133448-11142037 Capsella rubella
Carub.0008s2258 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11133448-11138447 Capsella rubella
Carub.0008s2258 10.0kb upstream 10.0kb upstream 13590 true scaffold_8: 11138448-11152037 Capsella rubella
Carub.0008s2258 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11142038-11152037 Capsella rubella
Carub.0008s2258 10.0kb downstream 10.0kb downstream 13590 true scaffold_8: 11128448-11142037 Capsella rubella
Carub.0008s2258 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11128448-11138447 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361963 5261 Brassicaceae View MSA
123837759 5264 Brassicales-Malvales View MSA
124322350 5266 SBM View MSA
124249800 5268 Malvidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain