Gene : Carub.0008s2270 C. rubella v1.1
Defline:  (1 of 1) PTHR10015//PTHR10015:SF168 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-2A Genomic Order:  2270
Name:  ? Carub.0008s2270 Secondary Identifier:  ? PAC:39253019
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2270 0.5kb upstream 0.5kb upstream 1776 true scaffold_8: 11206259-11208034 Capsella rubella
Carub.0008s2270 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11206259-11206758 Capsella rubella
Carub.0008s2270 0.5kb downstream 0.5kb downstream 1776 true scaffold_8: 11206759-11208534 Capsella rubella
Carub.0008s2270 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11208035-11208534 Capsella rubella
Carub.0008s2270 1.0kb upstream 1.0kb upstream 2276 true scaffold_8: 11205759-11208034 Capsella rubella
Carub.0008s2270 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11205759-11206758 Capsella rubella
Carub.0008s2270 1.0kb downstream 1.0kb downstream 2276 true scaffold_8: 11206759-11209034 Capsella rubella
Carub.0008s2270 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11208035-11209034 Capsella rubella
Carub.0008s2270 2.0kb upstream 2.0kb upstream 3276 true scaffold_8: 11204759-11208034 Capsella rubella
Carub.0008s2270 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11204759-11206758 Capsella rubella
Carub.0008s2270 2.0kb downstream 2.0kb downstream 3276 true scaffold_8: 11206759-11210034 Capsella rubella
Carub.0008s2270 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11208035-11210034 Capsella rubella
Carub.0008s2270 5.0kb upstream 5.0kb upstream 6276 true scaffold_8: 11201759-11208034 Capsella rubella
Carub.0008s2270 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11201759-11206758 Capsella rubella
Carub.0008s2270 5.0kb downstream 5.0kb downstream 6276 true scaffold_8: 11206759-11213034 Capsella rubella
Carub.0008s2270 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11208035-11213034 Capsella rubella
Carub.0008s2270 10.0kb upstream 10.0kb upstream 11276 true scaffold_8: 11196759-11208034 Capsella rubella
Carub.0008s2270 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11196759-11206758 Capsella rubella
Carub.0008s2270 10.0kb downstream 10.0kb downstream 11276 true scaffold_8: 11206759-11218034 Capsella rubella
Carub.0008s2270 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11208035-11218034 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369787 5261 Brassicaceae View MSA
123828746 5264 Brassicales-Malvales View MSA
124348408 5266 SBM View MSA
124238231 5268 Malvidae View MSA
124071788 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain