Gene : Carub.0008s1724 C. rubella v1.1
Defline:  (1 of 1) PTHR23416//PTHR23416:SF2 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 5 Genomic Order:  1724
Name:  ? Carub.0008s1724 Secondary Identifier:  ? PAC:39251037
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CYSTSYN-PWY Capsella rubella pathologic  
Crubella PWY-6936 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1724 0.5kb upstream 0.5kb upstream 1892 true scaffold_8: 9106129-9108020 Capsella rubella
Carub.0008s1724 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9107521-9108020 Capsella rubella
Carub.0008s1724 0.5kb downstream 0.5kb downstream 1892 true scaffold_8: 9105629-9107520 Capsella rubella
Carub.0008s1724 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9105629-9106128 Capsella rubella
Carub.0008s1724 1.0kb upstream 1.0kb upstream 2392 true scaffold_8: 9106129-9108520 Capsella rubella
Carub.0008s1724 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9107521-9108520 Capsella rubella
Carub.0008s1724 1.0kb downstream 1.0kb downstream 2392 true scaffold_8: 9105129-9107520 Capsella rubella
Carub.0008s1724 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9105129-9106128 Capsella rubella
Carub.0008s1724 2.0kb upstream 2.0kb upstream 3392 true scaffold_8: 9106129-9109520 Capsella rubella
Carub.0008s1724 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9107521-9109520 Capsella rubella
Carub.0008s1724 2.0kb downstream 2.0kb downstream 3392 true scaffold_8: 9104129-9107520 Capsella rubella
Carub.0008s1724 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9104129-9106128 Capsella rubella
Carub.0008s1724 5.0kb upstream 5.0kb upstream 6392 true scaffold_8: 9106129-9112520 Capsella rubella
Carub.0008s1724 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9107521-9112520 Capsella rubella
Carub.0008s1724 5.0kb downstream 5.0kb downstream 6392 true scaffold_8: 9101129-9107520 Capsella rubella
Carub.0008s1724 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9101129-9106128 Capsella rubella
Carub.0008s1724 10.0kb upstream 10.0kb upstream 11392 true scaffold_8: 9106129-9117520 Capsella rubella
Carub.0008s1724 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9107521-9117520 Capsella rubella
Carub.0008s1724 10.0kb downstream 10.0kb downstream 11392 true scaffold_8: 9096129-9107520 Capsella rubella
Carub.0008s1724 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9096129-9106128 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368813 5261 Brassicaceae View MSA
123828462 5264 Brassicales-Malvales View MSA
124338589 5266 SBM View MSA
124250792 5268 Malvidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain