Gene : Carub.0008s1746 C. rubella v1.1
Defline:  (1 of 5) PF05553//PF14364 - Cotton fibre expressed protein (DUF761) // Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  1746
Name:  ? Carub.0008s1746 Secondary Identifier:  ? PAC:39251713
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1746 0.5kb upstream 0.5kb upstream 2295 true scaffold_8: 9210891-9213185 Capsella rubella
Carub.0008s1746 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9212686-9213185 Capsella rubella
Carub.0008s1746 0.5kb downstream 0.5kb downstream 2295 true scaffold_8: 9210391-9212685 Capsella rubella
Carub.0008s1746 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9210391-9210890 Capsella rubella
Carub.0008s1746 1.0kb upstream 1.0kb upstream 2795 true scaffold_8: 9210891-9213685 Capsella rubella
Carub.0008s1746 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9212686-9213685 Capsella rubella
Carub.0008s1746 1.0kb downstream 1.0kb downstream 2795 true scaffold_8: 9209891-9212685 Capsella rubella
Carub.0008s1746 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9209891-9210890 Capsella rubella
Carub.0008s1746 2.0kb upstream 2.0kb upstream 3795 true scaffold_8: 9210891-9214685 Capsella rubella
Carub.0008s1746 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9212686-9214685 Capsella rubella
Carub.0008s1746 2.0kb downstream 2.0kb downstream 3795 true scaffold_8: 9208891-9212685 Capsella rubella
Carub.0008s1746 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9208891-9210890 Capsella rubella
Carub.0008s1746 5.0kb upstream 5.0kb upstream 6795 true scaffold_8: 9210891-9217685 Capsella rubella
Carub.0008s1746 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9212686-9217685 Capsella rubella
Carub.0008s1746 5.0kb downstream 5.0kb downstream 6795 true scaffold_8: 9205891-9212685 Capsella rubella
Carub.0008s1746 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9205891-9210890 Capsella rubella
Carub.0008s1746 10.0kb upstream 10.0kb upstream 11795 true scaffold_8: 9210891-9222685 Capsella rubella
Carub.0008s1746 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9212686-9222685 Capsella rubella
Carub.0008s1746 10.0kb downstream 10.0kb downstream 11795 true scaffold_8: 9200891-9212685 Capsella rubella
Carub.0008s1746 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9200891-9210890 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376723 5261 Brassicaceae View MSA
123801334 5264 Brassicales-Malvales View MSA
124349814 5266 SBM View MSA
124244667 5268 Malvidae View MSA
124071784 5270 Rosid View MSA
123749105 5271 Pentapetalae View MSA
122787298 5272 Eudicot View MSA
122041618 5273 Angiosperm View MSA
121309871 5274 Embryophyte View MSA
123347511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain