Gene : Carub.0006s0694 C. rubella v1.1
Defline:  (1 of 2) PF06549 - Protein of unknown function (DUF1118) (DUF1118) Genomic Order:  694
Name:  ? Carub.0006s0694 Secondary Identifier:  ? PAC:39246322
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0694 0.5kb upstream 0.5kb upstream 1452 true scaffold_6: 2549148-2550599 Capsella rubella
Carub.0006s0694 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2549148-2549647 Capsella rubella
Carub.0006s0694 0.5kb downstream 0.5kb downstream 1452 true scaffold_6: 2549648-2551099 Capsella rubella
Carub.0006s0694 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2550600-2551099 Capsella rubella
Carub.0006s0694 1.0kb upstream 1.0kb upstream 1952 true scaffold_6: 2548648-2550599 Capsella rubella
Carub.0006s0694 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2548648-2549647 Capsella rubella
Carub.0006s0694 1.0kb downstream 1.0kb downstream 1952 true scaffold_6: 2549648-2551599 Capsella rubella
Carub.0006s0694 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2550600-2551599 Capsella rubella
Carub.0006s0694 2.0kb upstream 2.0kb upstream 2952 true scaffold_6: 2547648-2550599 Capsella rubella
Carub.0006s0694 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2547648-2549647 Capsella rubella
Carub.0006s0694 2.0kb downstream 2.0kb downstream 2952 true scaffold_6: 2549648-2552599 Capsella rubella
Carub.0006s0694 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2550600-2552599 Capsella rubella
Carub.0006s0694 5.0kb upstream 5.0kb upstream 5952 true scaffold_6: 2544648-2550599 Capsella rubella
Carub.0006s0694 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2544648-2549647 Capsella rubella
Carub.0006s0694 5.0kb downstream 5.0kb downstream 5952 true scaffold_6: 2549648-2555599 Capsella rubella
Carub.0006s0694 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2550600-2555599 Capsella rubella
Carub.0006s0694 10.0kb upstream 10.0kb upstream 10952 true scaffold_6: 2539648-2550599 Capsella rubella
Carub.0006s0694 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2539648-2549647 Capsella rubella
Carub.0006s0694 10.0kb downstream 10.0kb downstream 10952 true scaffold_6: 2549648-2560599 Capsella rubella
Carub.0006s0694 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2550600-2560599 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373176 5261 Brassicaceae View MSA
123830654 5264 Brassicales-Malvales View MSA
124345400 5266 SBM View MSA
124237632 5268 Malvidae View MSA
124069799 5270 Rosid View MSA
123739706 5271 Pentapetalae View MSA
122790569 5272 Eudicot View MSA
122046942 5273 Angiosperm View MSA
121348217 5274 Embryophyte View MSA
123424979 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain