Gene : Carub.0008s1422 C. rubella v1.1
Defline:  (1 of 9) PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Genomic Order:  1422
Name:  ? Carub.0008s1422 Secondary Identifier:  ? PAC:39252015
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1422 0.5kb upstream 0.5kb upstream 1268 true scaffold_8: 7996518-7997785 Capsella rubella
Carub.0008s1422 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7996518-7997017 Capsella rubella
Carub.0008s1422 0.5kb downstream 0.5kb downstream 1268 true scaffold_8: 7997018-7998285 Capsella rubella
Carub.0008s1422 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7997786-7998285 Capsella rubella
Carub.0008s1422 1.0kb upstream 1.0kb upstream 1768 true scaffold_8: 7996018-7997785 Capsella rubella
Carub.0008s1422 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7996018-7997017 Capsella rubella
Carub.0008s1422 1.0kb downstream 1.0kb downstream 1768 true scaffold_8: 7997018-7998785 Capsella rubella
Carub.0008s1422 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7997786-7998785 Capsella rubella
Carub.0008s1422 2.0kb upstream 2.0kb upstream 2768 true scaffold_8: 7995018-7997785 Capsella rubella
Carub.0008s1422 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7995018-7997017 Capsella rubella
Carub.0008s1422 2.0kb downstream 2.0kb downstream 2768 true scaffold_8: 7997018-7999785 Capsella rubella
Carub.0008s1422 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7997786-7999785 Capsella rubella
Carub.0008s1422 5.0kb upstream 5.0kb upstream 5768 true scaffold_8: 7992018-7997785 Capsella rubella
Carub.0008s1422 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7992018-7997017 Capsella rubella
Carub.0008s1422 5.0kb downstream 5.0kb downstream 5768 true scaffold_8: 7997018-8002785 Capsella rubella
Carub.0008s1422 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7997786-8002785 Capsella rubella
Carub.0008s1422 10.0kb upstream 10.0kb upstream 10768 true scaffold_8: 7987018-7997785 Capsella rubella
Carub.0008s1422 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7987018-7997017 Capsella rubella
Carub.0008s1422 10.0kb downstream 10.0kb downstream 10768 true scaffold_8: 7997018-8007785 Capsella rubella
Carub.0008s1422 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7997786-8007785 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343639 5261 Brassicaceae View MSA
123837260 5264 Brassicales-Malvales View MSA
124322274 5266 SBM View MSA
124252360 5268 Malvidae View MSA
124074172 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain