Gene : Carub.0008s1616 C. rubella v1.1
Defline:  (1 of 3) 2.7.7.1 - Nicotinamide-nucleotide adenylyltransferase / NMNAT Genomic Order:  1616
Name:  ? Carub.0008s1616 Secondary Identifier:  ? PAC:39251511
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5381 Capsella rubella pathologic  
Crubella PWY-5653 Capsella rubella pathologic  
Crubella PYRIDNUCSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1616 0.5kb upstream 0.5kb upstream 2814 true scaffold_8: 8708214-8711027 Capsella rubella
Carub.0008s1616 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8710528-8711027 Capsella rubella
Carub.0008s1616 0.5kb downstream 0.5kb downstream 2814 true scaffold_8: 8707714-8710527 Capsella rubella
Carub.0008s1616 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8707714-8708213 Capsella rubella
Carub.0008s1616 1.0kb upstream 1.0kb upstream 3314 true scaffold_8: 8708214-8711527 Capsella rubella
Carub.0008s1616 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8710528-8711527 Capsella rubella
Carub.0008s1616 1.0kb downstream 1.0kb downstream 3314 true scaffold_8: 8707214-8710527 Capsella rubella
Carub.0008s1616 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8707214-8708213 Capsella rubella
Carub.0008s1616 2.0kb upstream 2.0kb upstream 4314 true scaffold_8: 8708214-8712527 Capsella rubella
Carub.0008s1616 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8710528-8712527 Capsella rubella
Carub.0008s1616 2.0kb downstream 2.0kb downstream 4314 true scaffold_8: 8706214-8710527 Capsella rubella
Carub.0008s1616 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8706214-8708213 Capsella rubella
Carub.0008s1616 5.0kb upstream 5.0kb upstream 7314 true scaffold_8: 8708214-8715527 Capsella rubella
Carub.0008s1616 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8710528-8715527 Capsella rubella
Carub.0008s1616 5.0kb downstream 5.0kb downstream 7314 true scaffold_8: 8703214-8710527 Capsella rubella
Carub.0008s1616 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8703214-8708213 Capsella rubella
Carub.0008s1616 10.0kb upstream 10.0kb upstream 12314 true scaffold_8: 8708214-8720527 Capsella rubella
Carub.0008s1616 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8710528-8720527 Capsella rubella
Carub.0008s1616 10.0kb downstream 10.0kb downstream 12314 true scaffold_8: 8698214-8710527 Capsella rubella
Carub.0008s1616 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8698214-8708213 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374486 5261 Brassicaceae View MSA
123830117 5264 Brassicales-Malvales View MSA
124339830 5266 SBM View MSA
124240568 5268 Malvidae View MSA
124066863 5270 Rosid View MSA
123746068 5271 Pentapetalae View MSA
122786930 5272 Eudicot View MSA
122041896 5273 Angiosperm View MSA
121349173 5274 Embryophyte View MSA
123427443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain