Gene : Carub.0008s1625 C. rubella v1.1
Defline:  (1 of 2) 2.1.1.178 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase Genomic Order:  1625
Name:  ? Carub.0008s1625 Secondary Identifier:  ? PAC:39250788
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1625 0.5kb upstream 0.5kb upstream 4515 true scaffold_8: 8744256-8748770 Capsella rubella
Carub.0008s1625 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8748271-8748770 Capsella rubella
Carub.0008s1625 0.5kb downstream 0.5kb downstream 4515 true scaffold_8: 8743756-8748270 Capsella rubella
Carub.0008s1625 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8743756-8744255 Capsella rubella
Carub.0008s1625 1.0kb upstream 1.0kb upstream 5015 true scaffold_8: 8744256-8749270 Capsella rubella
Carub.0008s1625 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8748271-8749270 Capsella rubella
Carub.0008s1625 1.0kb downstream 1.0kb downstream 5015 true scaffold_8: 8743256-8748270 Capsella rubella
Carub.0008s1625 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8743256-8744255 Capsella rubella
Carub.0008s1625 2.0kb upstream 2.0kb upstream 6015 true scaffold_8: 8744256-8750270 Capsella rubella
Carub.0008s1625 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8748271-8750270 Capsella rubella
Carub.0008s1625 2.0kb downstream 2.0kb downstream 6015 true scaffold_8: 8742256-8748270 Capsella rubella
Carub.0008s1625 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8742256-8744255 Capsella rubella
Carub.0008s1625 5.0kb upstream 5.0kb upstream 9015 true scaffold_8: 8744256-8753270 Capsella rubella
Carub.0008s1625 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8748271-8753270 Capsella rubella
Carub.0008s1625 5.0kb downstream 5.0kb downstream 9015 true scaffold_8: 8739256-8748270 Capsella rubella
Carub.0008s1625 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8739256-8744255 Capsella rubella
Carub.0008s1625 10.0kb upstream 10.0kb upstream 14015 true scaffold_8: 8744256-8758270 Capsella rubella
Carub.0008s1625 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8748271-8758270 Capsella rubella
Carub.0008s1625 10.0kb downstream 10.0kb downstream 14015 true scaffold_8: 8734256-8748270 Capsella rubella
Carub.0008s1625 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8734256-8744255 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370457 5261 Brassicaceae View MSA
123799968 5264 Brassicales-Malvales View MSA
124297435 5266 SBM View MSA
124250297 5268 Malvidae View MSA
124073549 5270 Rosid View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain