Gene : Carub.0008s1712 C. rubella v1.1
Defline:  (1 of 5) 1.13.99.1 - Inositol oxygenase / Myo-inositol oxygenase Genomic Order:  1712
Name:  ? Carub.0008s1712 Secondary Identifier:  ? PAC:39251810
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-4841 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1712 0.5kb upstream 0.5kb upstream 2736 true scaffold_8: 9066297-9069032 Capsella rubella
Carub.0008s1712 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9068533-9069032 Capsella rubella
Carub.0008s1712 0.5kb downstream 0.5kb downstream 2736 true scaffold_8: 9065797-9068532 Capsella rubella
Carub.0008s1712 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9065797-9066296 Capsella rubella
Carub.0008s1712 1.0kb upstream 1.0kb upstream 3236 true scaffold_8: 9066297-9069532 Capsella rubella
Carub.0008s1712 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9068533-9069532 Capsella rubella
Carub.0008s1712 1.0kb downstream 1.0kb downstream 3236 true scaffold_8: 9065297-9068532 Capsella rubella
Carub.0008s1712 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9065297-9066296 Capsella rubella
Carub.0008s1712 2.0kb upstream 2.0kb upstream 4236 true scaffold_8: 9066297-9070532 Capsella rubella
Carub.0008s1712 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9068533-9070532 Capsella rubella
Carub.0008s1712 2.0kb downstream 2.0kb downstream 4236 true scaffold_8: 9064297-9068532 Capsella rubella
Carub.0008s1712 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9064297-9066296 Capsella rubella
Carub.0008s1712 5.0kb upstream 5.0kb upstream 7236 true scaffold_8: 9066297-9073532 Capsella rubella
Carub.0008s1712 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9068533-9073532 Capsella rubella
Carub.0008s1712 5.0kb downstream 5.0kb downstream 7236 true scaffold_8: 9061297-9068532 Capsella rubella
Carub.0008s1712 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9061297-9066296 Capsella rubella
Carub.0008s1712 10.0kb upstream 10.0kb upstream 12236 true scaffold_8: 9066297-9078532 Capsella rubella
Carub.0008s1712 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9068533-9078532 Capsella rubella
Carub.0008s1712 10.0kb downstream 10.0kb downstream 12236 true scaffold_8: 9056297-9068532 Capsella rubella
Carub.0008s1712 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9056297-9066296 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367714 5261 Brassicaceae View MSA
123838196 5264 Brassicales-Malvales View MSA
124340567 5266 SBM View MSA
124249980 5268 Malvidae View MSA
124067976 5270 Rosid View MSA
123743695 5271 Pentapetalae View MSA
122796011 5272 Eudicot View MSA
122042225 5273 Angiosperm View MSA
121347706 5274 Embryophyte View MSA
123428319 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain