Gene : Carub.0008s2072 C. rubella v1.1
Defline:  (1 of 1) PTHR11709//PTHR11709:SF66 - MULTI-COPPER OXIDASE // LACCASE-17 Genomic Order:  2072
Name:  ? Carub.0008s2072 Secondary Identifier:  ? PAC:39251902
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5466 Capsella rubella pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2072 0.5kb upstream 0.5kb upstream 2659 true scaffold_8: 10404567-10407225 Capsella rubella
Carub.0008s2072 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10404567-10405066 Capsella rubella
Carub.0008s2072 0.5kb downstream 0.5kb downstream 2659 true scaffold_8: 10405067-10407725 Capsella rubella
Carub.0008s2072 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10407226-10407725 Capsella rubella
Carub.0008s2072 1.0kb upstream 1.0kb upstream 3159 true scaffold_8: 10404067-10407225 Capsella rubella
Carub.0008s2072 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10404067-10405066 Capsella rubella
Carub.0008s2072 1.0kb downstream 1.0kb downstream 3159 true scaffold_8: 10405067-10408225 Capsella rubella
Carub.0008s2072 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10407226-10408225 Capsella rubella
Carub.0008s2072 2.0kb upstream 2.0kb upstream 4159 true scaffold_8: 10403067-10407225 Capsella rubella
Carub.0008s2072 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10403067-10405066 Capsella rubella
Carub.0008s2072 2.0kb downstream 2.0kb downstream 4159 true scaffold_8: 10405067-10409225 Capsella rubella
Carub.0008s2072 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10407226-10409225 Capsella rubella
Carub.0008s2072 5.0kb upstream 5.0kb upstream 7159 true scaffold_8: 10400067-10407225 Capsella rubella
Carub.0008s2072 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10400067-10405066 Capsella rubella
Carub.0008s2072 5.0kb downstream 5.0kb downstream 7159 true scaffold_8: 10405067-10412225 Capsella rubella
Carub.0008s2072 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10407226-10412225 Capsella rubella
Carub.0008s2072 10.0kb upstream 10.0kb upstream 12159 true scaffold_8: 10395067-10407225 Capsella rubella
Carub.0008s2072 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10395067-10405066 Capsella rubella
Carub.0008s2072 10.0kb downstream 10.0kb downstream 12159 true scaffold_8: 10405067-10417225 Capsella rubella
Carub.0008s2072 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10407226-10417225 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361534 5261 Brassicaceae View MSA
123836632 5264 Brassicales-Malvales View MSA
124344655 5266 SBM View MSA
124251749 5268 Malvidae View MSA
124062715 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain