Gene : Carub.0008s2112 C. rubella v1.1
Defline:  (1 of 2) PTHR10782//PTHR10782:SF34 - ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN // E3 SUMO-PROTEIN LIGASE SIZ1 Genomic Order:  2112
Name:  ? Carub.0008s2112 Secondary Identifier:  ? PAC:39252727
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2112 0.5kb upstream 0.5kb upstream 7307 true scaffold_8: 10547758-10555064 Capsella rubella
Carub.0008s2112 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10547758-10548257 Capsella rubella
Carub.0008s2112 0.5kb downstream 0.5kb downstream 7307 true scaffold_8: 10548258-10555564 Capsella rubella
Carub.0008s2112 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10555065-10555564 Capsella rubella
Carub.0008s2112 1.0kb upstream 1.0kb upstream 7807 true scaffold_8: 10547258-10555064 Capsella rubella
Carub.0008s2112 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10547258-10548257 Capsella rubella
Carub.0008s2112 1.0kb downstream 1.0kb downstream 7807 true scaffold_8: 10548258-10556064 Capsella rubella
Carub.0008s2112 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10555065-10556064 Capsella rubella
Carub.0008s2112 2.0kb upstream 2.0kb upstream 8807 true scaffold_8: 10546258-10555064 Capsella rubella
Carub.0008s2112 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10546258-10548257 Capsella rubella
Carub.0008s2112 2.0kb downstream 2.0kb downstream 8807 true scaffold_8: 10548258-10557064 Capsella rubella
Carub.0008s2112 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10555065-10557064 Capsella rubella
Carub.0008s2112 5.0kb upstream 5.0kb upstream 11807 true scaffold_8: 10543258-10555064 Capsella rubella
Carub.0008s2112 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10543258-10548257 Capsella rubella
Carub.0008s2112 5.0kb downstream 5.0kb downstream 11807 true scaffold_8: 10548258-10560064 Capsella rubella
Carub.0008s2112 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10555065-10560064 Capsella rubella
Carub.0008s2112 10.0kb upstream 10.0kb upstream 16807 true scaffold_8: 10538258-10555064 Capsella rubella
Carub.0008s2112 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10538258-10548257 Capsella rubella
Carub.0008s2112 10.0kb downstream 10.0kb downstream 16807 true scaffold_8: 10548258-10565064 Capsella rubella
Carub.0008s2112 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10555065-10565064 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375146 5261 Brassicaceae View MSA
123836950 5264 Brassicales-Malvales View MSA
124338996 5266 SBM View MSA
124242030 5268 Malvidae View MSA
124063048 5270 Rosid View MSA
123737039 5271 Pentapetalae View MSA
122786497 5272 Eudicot View MSA
122046306 5273 Angiosperm View MSA
121350287 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain