Gene : Carub.0008s2118 C. rubella v1.1
Defline:  (1 of 1) PTHR32077:SF10 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12 Genomic Order:  2118
Name:  ? Carub.0008s2118 Secondary Identifier:  ? PAC:39251442
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2118 0.5kb upstream 0.5kb upstream 1253 true scaffold_8: 10580666-10581918 Capsella rubella
Carub.0008s2118 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10581419-10581918 Capsella rubella
Carub.0008s2118 0.5kb downstream 0.5kb downstream 1253 true scaffold_8: 10580166-10581418 Capsella rubella
Carub.0008s2118 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10580166-10580665 Capsella rubella
Carub.0008s2118 1.0kb upstream 1.0kb upstream 1753 true scaffold_8: 10580666-10582418 Capsella rubella
Carub.0008s2118 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10581419-10582418 Capsella rubella
Carub.0008s2118 1.0kb downstream 1.0kb downstream 1753 true scaffold_8: 10579666-10581418 Capsella rubella
Carub.0008s2118 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10579666-10580665 Capsella rubella
Carub.0008s2118 2.0kb upstream 2.0kb upstream 2753 true scaffold_8: 10580666-10583418 Capsella rubella
Carub.0008s2118 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10581419-10583418 Capsella rubella
Carub.0008s2118 2.0kb downstream 2.0kb downstream 2753 true scaffold_8: 10578666-10581418 Capsella rubella
Carub.0008s2118 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10578666-10580665 Capsella rubella
Carub.0008s2118 5.0kb upstream 5.0kb upstream 5753 true scaffold_8: 10580666-10586418 Capsella rubella
Carub.0008s2118 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10581419-10586418 Capsella rubella
Carub.0008s2118 5.0kb downstream 5.0kb downstream 5753 true scaffold_8: 10575666-10581418 Capsella rubella
Carub.0008s2118 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10575666-10580665 Capsella rubella
Carub.0008s2118 10.0kb upstream 10.0kb upstream 10753 true scaffold_8: 10580666-10591418 Capsella rubella
Carub.0008s2118 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10581419-10591418 Capsella rubella
Carub.0008s2118 10.0kb downstream 10.0kb downstream 10753 true scaffold_8: 10570666-10581418 Capsella rubella
Carub.0008s2118 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10570666-10580665 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372865 5261 Brassicaceae View MSA
123837342 5264 Brassicales-Malvales View MSA
124337518 5266 SBM View MSA
124242761 5268 Malvidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain