Gene : Carub.0008s2143 C. rubella v1.1
Defline:  (1 of 1) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  2143
Name:  ? Carub.0008s2143 Secondary Identifier:  ? PAC:39250995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2143 0.5kb upstream 0.5kb upstream 3015 true scaffold_8: 10684788-10687802 Capsella rubella
Carub.0008s2143 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10684788-10685287 Capsella rubella
Carub.0008s2143 0.5kb downstream 0.5kb downstream 3015 true scaffold_8: 10685288-10688302 Capsella rubella
Carub.0008s2143 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10687803-10688302 Capsella rubella
Carub.0008s2143 1.0kb upstream 1.0kb upstream 3515 true scaffold_8: 10684288-10687802 Capsella rubella
Carub.0008s2143 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10684288-10685287 Capsella rubella
Carub.0008s2143 1.0kb downstream 1.0kb downstream 3515 true scaffold_8: 10685288-10688802 Capsella rubella
Carub.0008s2143 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10687803-10688802 Capsella rubella
Carub.0008s2143 2.0kb upstream 2.0kb upstream 4515 true scaffold_8: 10683288-10687802 Capsella rubella
Carub.0008s2143 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10683288-10685287 Capsella rubella
Carub.0008s2143 2.0kb downstream 2.0kb downstream 4515 true scaffold_8: 10685288-10689802 Capsella rubella
Carub.0008s2143 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10687803-10689802 Capsella rubella
Carub.0008s2143 5.0kb upstream 5.0kb upstream 7515 true scaffold_8: 10680288-10687802 Capsella rubella
Carub.0008s2143 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10680288-10685287 Capsella rubella
Carub.0008s2143 5.0kb downstream 5.0kb downstream 7515 true scaffold_8: 10685288-10692802 Capsella rubella
Carub.0008s2143 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10687803-10692802 Capsella rubella
Carub.0008s2143 10.0kb upstream 10.0kb upstream 12515 true scaffold_8: 10675288-10687802 Capsella rubella
Carub.0008s2143 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10675288-10685287 Capsella rubella
Carub.0008s2143 10.0kb downstream 10.0kb downstream 12515 true scaffold_8: 10685288-10697802 Capsella rubella
Carub.0008s2143 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10687803-10697802 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363091 5261 Brassicaceae View MSA
123840501 5264 Brassicales-Malvales View MSA
124338425 5266 SBM View MSA
124237308 5268 Malvidae View MSA
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain